FFCP PHASE1:Hg19::chr20:4450804..4450813,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4450804..4450813,- | |||
|coexpression_cluster_id=C2620 | |coexpression_cluster_id=C2620 | ||
|description=CAGE_peak_at_chr20:4450804..4450813,- | |description=CAGE_peak_at_chr20:4450804..4450813,- | ||
|id=chr20:4450804..4450813,- | |id=chr20:4450804..4450813,- | ||
|ontology_enrichment_celltype=CL:0002620!4.81e-26!23;CL:0000057!2.50e-08!75;CL:0002574!4.99e-08!1 | |ontology_enrichment_celltype=CL:0002620!4.81e-26!23;CL:0000057!2.50e-08!75;CL:0002574!4.99e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000243;3.40e-18;15!CL:0000125;3.40e-18;15!CL:0000095;2.27e-16;17!CL:0000346;2.89e-12;3!CL:1000428;2.89e-12;3!CL:0002319;9.28e-12;25!CL:0002559;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.61e-18,15;CL:0000125,3.61e-18,15;CL:0000030,3.61e-18,15;CL:0000339,3.61e-18,15;CL:0000095,2.39e-16,17;CL:0000123,2.39e-16,17;CL:0000333,7.84e-13,41;CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0002319,9.63e-12,25;CL:0000133,3.28e-09,59;CL:0002559,6.55e-08,5;CL:0000221,1.11e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.28e-27;10!CL:0000339;3.40e-18;15!UBERON:0009847;2.19e-12;3!UBERON:0003353;2.19e-12;3 | |||
|ontology_enrichment_disease=DOID:171!1.90e-16!10;DOID:17!3.83e-12!5;DOID:450!3.83e-12!5;DOID:66!3.83e-12!5;DOID:423!3.83e-12!5;DOID:0080000!3.83e-12!5;DOID:11722!3.83e-12!5;DOID:3093!2.92e-09!11;DOID:3095!2.37e-07!22;DOID:2994!2.37e-07!22 | |ontology_enrichment_disease=DOID:171!1.90e-16!10;DOID:17!3.83e-12!5;DOID:450!3.83e-12!5;DOID:66!3.83e-12!5;DOID:423!3.83e-12!5;DOID:0080000!3.83e-12!5;DOID:11722!3.83e-12!5;DOID:3093!2.92e-09!11;DOID:3095!2.37e-07!22;DOID:2994!2.37e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3093;2.13e-25;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.32e-25,11 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.94e-17!40;UBERON:0002199!2.79e-15!45;UBERON:0002416!2.79e-15!45;UBERON:0003102!5.73e-09!95 | |ontology_enrichment_uberon=UBERON:0002097!1.94e-17!40;UBERON:0002199!2.79e-15!45;UBERON:0002416!2.79e-15!45;UBERON:0003102!5.73e-09!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.89e-12;3!UBERON:0001992;2.89e-12;3!UBERON:0002346;1.27e-09;4!UBERON:0000923;1.27e-09;4!UBERON:0010316;1.27e-09;4!UBERON:0005291;1.27e-09;4!UBERON:0002050;5.92e-08;5!UBERON:0005423;5.92e-08;5!UBERON:0002073;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.59e-12,3;UBERON:0001992,2.59e-12,3;UBERON:0002073,6.55e-08,5;UBERON:0005086,6.55e-08,5 | |||
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|short_description=p@chr20:4450804..4450813,- | |short_description=p@chr20:4450804..4450813,- | ||
}} | }} |
Latest revision as of 14:32, 28 July 2015
Short description: | p@chr20:4450804..4450813, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4450804..4450813, - |
Coexpression cluster: | C2620_glioblastoma_peripheral_prostate_tridermal_neuroepithelioma_tubular_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.61e-18 | 15 |
glial cell | 3.61e-18 | 15 |
glioblast | 3.61e-18 | 15 |
glioblast (sensu Vertebrata) | 3.61e-18 | 15 |
neuron associated cell | 2.39e-16 | 17 |
neuron associated cell (sensu Vertebrata) | 2.39e-16 | 17 |
migratory neural crest cell | 7.84e-13 | 41 |
hair follicle dermal papilla cell | 2.59e-12 | 3 |
stem cell of epidermis | 2.59e-12 | 3 |
neural cell | 9.63e-12 | 25 |
neurectodermal cell | 3.28e-09 | 59 |
hair follicle cell | 6.55e-08 | 5 |
ectodermal cell | 1.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.59e-12 | 3 |
papillary layer of dermis | 2.59e-12 | 3 |
hair follicle | 6.55e-08 | 5 |
hair follicle placode | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.32e-25 | 11 |