FFCP PHASE1:Hg19::chr20:4451008..4451026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4451008..4451026,- | |||
|description=CAGE_peak_at_chr20:4451008..4451026,- | |description=CAGE_peak_at_chr20:4451008..4451026,- | ||
|id=chr20:4451008..4451026,- | |id=chr20:4451008..4451026,- | ||
|ontology_enrichment_celltype=CL:0002620!1.94e-34!23;CL:0000057!3.22e-26!75;CL:0000055!9.86e-21!180;CL:0002552!1.71e-13!5;CL:0002551!1.12e-07!6;CL:0002556!2.36e-07!6 | |ontology_enrichment_celltype=CL:0002620!1.94e-34!23;CL:0000057!3.22e-26!75;CL:0000055!9.86e-21!180;CL:0002552!1.71e-13!5;CL:0002551!1.12e-07!6;CL:0002556!2.36e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.87e-29;23!CL:0002552;2.61e-11;5!CL:0002551;1.65e-09;6!CL:0000346;3.82e-09;3!CL:1000428;3.82e-09;3!CL:0000057;7.77e-09;73!CL:0002574;1.17e-07;1!CL:0002601;1.29e-07;1!CL:0000228;1.77e-07;1!CL:0002372;1.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.57e-29,23;CL:0000057,1.46e-14,76;CL:0002552,2.86e-11,5;CL:0002551,1.37e-09,6;CL:0000346,3.67e-09,3;CL:1000428,3.67e-09,3;CL:0002574,1.18e-07,1;CL:0002601,1.25e-07,1;CL:0000228,1.42e-07,1;CL:0002372,1.42e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.05e-14!5;DOID:450!3.05e-14!5;DOID:66!3.05e-14!5;DOID:423!3.05e-14!5;DOID:0080000!3.05e-14!5;DOID:11722!3.05e-14!5;DOID:171!6.44e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:17;1.57e-19;5!DOID:450;1.57e-19;5!DOID:66;1.57e-19;5!DOID:423;1.57e-19;5!DOID:0080000;1.57e-19;5!DOID:11722;1.57e-19;5!DOID:171;3.12e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.57e-19,5;DOID:450,1.57e-19,5;DOID:66,1.57e-19,5;DOID:423,1.57e-19,5;DOID:0080000,1.57e-19,5;DOID:11722,1.57e-19,5;DOID:171,2.83e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.28e-28!45;UBERON:0002416!1.28e-28!45;UBERON:0002097!1.36e-27!40;UBERON:0003102!2.11e-27!95;UBERON:0002067!6.51e-11!9;UBERON:0004016!6.51e-11!9;UBERON:0010083!6.51e-11!9;UBERON:0001828!2.74e-08!8;UBERON:0000475!4.10e-08!365;UBERON:0000165!1.57e-07!28;UBERON:0000930!1.57e-07!28;UBERON:0001758!2.36e-07!6;UBERON:0003672!2.36e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.44e-25;4!UBERON:0000923;2.44e-25;4!UBERON:0010316;2.44e-25;4!UBERON:0005291;2.44e-25;4!UBERON:0002050;2.56e-20;5!UBERON:0005423;2.56e-20;5!UBERON:0002097;5.86e-18;41!UBERON:0002067;1.35e-16;9!UBERON:0002199;8.53e-14;46!UBERON:0002416;8.53e-14;46!UBERON:0003102;3.56e-12;50!UBERON:0000412;3.82e-09;3!UBERON:0001992;3.82e-09;3!UBERON:0001828;3.03e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.36e-22,41;UBERON:0002199,2.07e-19,46;UBERON:0002416,2.07e-19,46;UBERON:0002067,1.05e-16,9;UBERON:0004016,1.05e-16,9;UBERON:0010083,1.05e-16,9;UBERON:0003102,7.17e-16,99;UBERON:0000412,3.67e-09,3;UBERON:0001992,3.67e-09,3;UBERON:0001828,3.20e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,1.87296046098192,0,1.19558944441441,2.70099346880659,0,0.280901613404497,1.42907919878425,2.08818339430006,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.250237039743928,2.21651292387346,0,0.919463387397059,0,0,3.22901344239952,0.427114777637135,1.05965950579781,1.80054657650641,2.57631323096097,0,0.744467425326359,2.70042131586026,1.26668106709558,0.252433774244115,0.552299391853796,0.323292113637624,0,1.41052937518696,1.01736355386293,0,0,0,0,0,0,0,0,0,0,2.57296375277154,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.514137463516618,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60483156680839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1787388208397,26.9806064740323,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52340189153347,8.15902201236199,11.0158075047228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.471797825567689,0,5.26170842857478,5.73952284274544,1.73510069962603,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.6466351388453,0,0,0,0,0,0,0,0,0,0,0,7.89742953433691,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34558235096736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:4451008..4451026,- | |short_description=p@chr20:4451008..4451026,- | ||
}} | }} |
Latest revision as of 14:32, 28 July 2015
Short description: | p@chr20:4451008..4451026, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4451008..4451026, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.57e-29 | 23 |
fibroblast | 1.46e-14 | 76 |
fibroblast of gingiva | 2.86e-11 | 5 |
fibroblast of dermis | 1.37e-09 | 6 |
hair follicle dermal papilla cell | 3.67e-09 | 3 |
stem cell of epidermis | 3.67e-09 | 3 |
stromal cell of pancreas | 1.18e-07 | 1 |
uterine smooth muscle cell | 1.25e-07 | 1 |
multinucleate cell | 1.42e-07 | 1 |
myotube | 1.42e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.36e-22 | 41 |
integument | 2.07e-19 | 46 |
integumental system | 2.07e-19 | 46 |
dermis | 1.05e-16 | 9 |
dermatome | 1.05e-16 | 9 |
future dermis | 1.05e-16 | 9 |
surface structure | 7.17e-16 | 99 |
dermal papilla | 3.67e-09 | 3 |
papillary layer of dermis | 3.67e-09 | 3 |
gingiva | 3.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.57e-19 | 5 |
myotonic disease | 1.57e-19 | 5 |
muscle tissue disease | 1.57e-19 | 5 |
myopathy | 1.57e-19 | 5 |
muscular disease | 1.57e-19 | 5 |
myotonic dystrophy | 1.57e-19 | 5 |
neuroectodermal tumor | 2.83e-10 | 10 |