FFCP PHASE1:Hg19::chr21:47539028..47539037,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:47539028..47539037,+
|short_description=p@chr21:47539028..47539037,+
|description=CAGE_peak_at_chr21:47539028..47539037,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47539028..47539037,+ | |||
|description=CAGE_peak_at_chr21:47539028..47539037,+ | |||
|id=chr21:47539028..47539037,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.19e-38!180;CL:0000183!7.53e-23!59;CL:0000187!5.51e-21!54;CL:0000680!9.40e-21!57;CL:0000056!9.40e-21!57;CL:0000355!9.40e-21!57;CL:0000393!3.47e-19!60;CL:0000211!3.47e-19!60;CL:0000192!9.11e-17!42;CL:0000514!9.11e-17!42;CL:0000057!2.03e-16!75;CL:0000048!9.84e-13!430;CL:0000723!3.31e-12!436;CL:0000034!1.57e-11!444;CL:0000359!2.42e-11!32;CL:0002620!3.09e-11!23;CL:0000222!5.92e-09!119;CL:0000548!2.37e-08!679;CL:0000004!2.37e-08!679;CL:0000255!2.37e-08!679;CL:0000144!2.86e-08!625;CL:0000012!3.56e-08!682;CL:0002371!4.56e-08!591;CL:0000188!8.82e-08!9;CL:0002551!4.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002596;1.18e-21;2!CL:0002599;3.28e-11;1!CL:0002601;3.28e-11;1!CL:0000192;3.64e-11;43!CL:0000359;2.48e-10;32!CL:0002551;1.23e-07;6!CL:0002620;3.30e-07;23!CL:0000187;3.93e-07;55!CL:0000393;5.87e-07;61!CL:0000211;5.87e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,1.01e-21,2;CL:0000192,5.58e-14,43;CL:0000514,5.58e-14,43;CL:0002601,2.18e-11,1;CL:0002599,2.96e-11,1;CL:0000359,6.28e-11,32;CL:0000187,1.01e-10,55;CL:0000680,4.05e-10,58;CL:0000056,4.05e-10,58;CL:0000355,4.05e-10,58;CL:0000393,1.42e-09,61;CL:0000211,1.42e-09,61;CL:0002551,1.34e-07,6;CL:0002620,3.77e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.64e-11;43!CL:0000355;4.22e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.24e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.60e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.97e-26!83;UBERON:0002329!2.97e-26!83;UBERON:0003077!2.97e-26!83;UBERON:0003059!2.97e-26!83;UBERON:0007282!2.97e-26!83;UBERON:0009618!2.97e-26!83;UBERON:0007285!2.97e-26!83;UBERON:0004290!1.17e-23!70;UBERON:0000486!1.25e-20!82;UBERON:0001134!9.84e-19!61;UBERON:0002036!9.84e-19!61;UBERON:0003082!9.84e-19!61;UBERON:0005256!1.36e-18!143;UBERON:0002385!7.99e-18!63;UBERON:0001015!7.99e-18!63;UBERON:0000383!7.99e-18!63;UBERON:0003102!9.89e-12!95;UBERON:0002100!9.72e-11!216;UBERON:0000475!1.03e-10!365;UBERON:0003104!1.71e-09!238;UBERON:0009142!1.71e-09!238;UBERON:0002199!1.71e-08!45;UBERON:0002416!1.71e-08!45;UBERON:0002097!6.88e-08!40;UBERON:0000490!1.67e-07!138;UBERON:0001637!2.09e-07!42;UBERON:0003509!2.09e-07!42;UBERON:0004572!2.09e-07!42;UBERON:0002204!4.55e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;1.18e-21;2!UBERON:0002067;1.03e-10;9!UBERON:0004573;3.07e-07;33!UBERON:0004571;3.07e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,1.01e-21,2;UBERON:0002329,1.78e-15,71;UBERON:0003059,1.78e-15,71;UBERON:0007282,1.78e-15,71;UBERON:0004290,1.78e-15,71;UBERON:0009618,1.78e-15,71;UBERON:0003077,3.07e-15,72;UBERON:0007285,3.07e-15,72;UBERON:0007524,5.23e-15,73;UBERON:0007503,6.10e-14,78;UBERON:0000486,5.29e-13,83;UBERON:0002067,1.03e-10,9;UBERON:0004016,1.03e-10,9;UBERON:0010083,1.03e-10,9;UBERON:0005256,5.68e-10,122;UBERON:0001134,2.10e-09,62;UBERON:0002036,2.10e-09,62;UBERON:0003082,2.10e-09,62;UBERON:0002385,4.43e-09,64;UBERON:0001015,4.43e-09,64;UBERON:0000383,4.43e-09,64;UBERON:0003104,1.58e-08,160;UBERON:0009142,1.58e-08,160;UBERON:0001637,3.19e-08,42;UBERON:0003509,3.19e-08,42;UBERON:0004572,3.19e-08,42;UBERON:0000490,6.84e-08,148;UBERON:0004573,1.49e-07,33;UBERON:0004571,1.49e-07,33 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0.738726348460727,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,2.2818872861778,0.149448680551801,0.587172493218824,0.485618833104395,1.12360645361799,0.408308342509787,0.368502951935304,0.103325781175765,0,0,0.910161361938026,0,1.68336113954066,0.625592599359821,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0,0,0.211931901159562,0,0.824420233907511,0,0.744467425326359,0,0.876933046450788,0,0.276149695926898,0.161646056818812,0,1.0075209822764,2.20428770003634,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,1.95441710576241,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0.737476674166813,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.177561725313127,1.97105174433142,0,0.464841513839837,0,0,0,0.574072240823034,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0.924291702687866,0.15350367472613,0.551346289938122,0.322260734604821,0.145016693914229,0.681813019328807,0.356128142586949,0,0,0,0,0,0,2.0911118104818,0,0.532306030317022,1.73986598415015,0.37064843820784,0.143124886741991,0.744316738719335,0,0.190630193923825,0,0,3.81843897511124,2.35484592059769,0.719489830333259,0.274537029736055,0.117812402345686,0.808729926293264,0,0.421258456238981,1.46290121726877,0,0,0.682499557039929,0.141405431953713,0,1.10273068709225,0,0,0,0,0.608731130888112,0.30982349809975,1.40847801266121,0.573645408816206,0,0,1.77380532035299,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,1.00108261702862,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:47539028..47539037,+ | |||
}} | }} |
Latest revision as of 18:47, 28 July 2015
Short description: | p@chr21:47539028..47539037, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47539028..47539037, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 1.01e-21 | 2 |
smooth muscle cell | 5.58e-14 | 43 |
smooth muscle myoblast | 5.58e-14 | 43 |
uterine smooth muscle cell | 2.18e-11 | 1 |
smooth muscle cell of the esophagus | 2.96e-11 | 1 |
vascular associated smooth muscle cell | 6.28e-11 | 32 |
muscle cell | 1.01e-10 | 55 |
muscle precursor cell | 4.05e-10 | 58 |
myoblast | 4.05e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.05e-10 | 58 |
electrically responsive cell | 1.42e-09 | 61 |
electrically active cell | 1.42e-09 | 61 |
fibroblast of dermis | 1.34e-07 | 6 |
skin fibroblast | 3.77e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 1.01e-21 | 2 |
somite | 1.78e-15 | 71 |
presomitic mesoderm | 1.78e-15 | 71 |
presumptive segmental plate | 1.78e-15 | 71 |
dermomyotome | 1.78e-15 | 71 |
trunk paraxial mesoderm | 1.78e-15 | 71 |
paraxial mesoderm | 3.07e-15 | 72 |
presumptive paraxial mesoderm | 3.07e-15 | 72 |
dense mesenchyme tissue | 5.23e-15 | 73 |
epithelial vesicle | 6.10e-14 | 78 |
multilaminar epithelium | 5.29e-13 | 83 |
dermis | 1.03e-10 | 9 |
dermatome | 1.03e-10 | 9 |
future dermis | 1.03e-10 | 9 |
trunk mesenchyme | 5.68e-10 | 122 |
skeletal muscle tissue | 2.10e-09 | 62 |
striated muscle tissue | 2.10e-09 | 62 |
myotome | 2.10e-09 | 62 |
muscle tissue | 4.43e-09 | 64 |
musculature | 4.43e-09 | 64 |
musculature of body | 4.43e-09 | 64 |
mesenchyme | 1.58e-08 | 160 |
entire embryonic mesenchyme | 1.58e-08 | 160 |
artery | 3.19e-08 | 42 |
arterial blood vessel | 3.19e-08 | 42 |
arterial system | 3.19e-08 | 42 |
unilaminar epithelium | 6.84e-08 | 148 |
systemic artery | 1.49e-07 | 33 |
systemic arterial system | 1.49e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.60e-11 | 1 |