FFCP PHASE1:Hg19::chr2:108905063..108905076,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:108905063..108905076,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_at_chr2:108905063..108905076,- | |description=CAGE_peak_at_chr2:108905063..108905076,- | ||
|id=chr2:108905063..108905076,- | |id=chr2:108905063..108905076,- | ||
|ontology_enrichment_celltype=CL:0002549!1.38e-10!2 | |ontology_enrichment_celltype=CL:0002549!1.38e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;7.71e-21;1!CL:0000159;4.09e-11;2!CL:0002549;4.09e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,6.31e-21,1;CL:0000159,3.70e-11,2;CL:0002549,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.85e-09;10!UBERON:0007687;4.85e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;7.71e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.31e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.16e-14!3;UBERON:0005290!1.16e-14!3;UBERON:0010096!1.16e-14!3;UBERON:0003947!1.38e-10!2;UBERON:0005629!1.38e-10!2;UBERON:0005358!1.38e-10!2;UBERON:0001886!1.38e-10!2;UBERON:0004086!1.38e-10!2;UBERON:0005282!1.38e-10!2;UBERON:0005281!1.38e-10!2;UBERON:0002200!1.80e-10!11;UBERON:0006876!1.80e-10!11;UBERON:0000007!3.21e-10!2;UBERON:0002616!4.01e-10!59;UBERON:0003075!9.47e-10!86;UBERON:0007284!9.47e-10!86;UBERON:0005743!1.07e-09!86;UBERON:0002298!2.16e-09!8;UBERON:0000153!3.26e-09!129;UBERON:0007811!3.26e-09!129;UBERON:0002346!3.58e-09!90;UBERON:0005284!4.44e-09!5;UBERON:0001017!5.67e-09!82;UBERON:0000033!9.22e-09!123;UBERON:0000073!1.76e-08!94;UBERON:0001016!1.76e-08!94;UBERON:0000955!3.81e-08!69;UBERON:0006238!3.81e-08!69;UBERON:0001049!2.43e-07!57;UBERON:0005068!2.43e-07!57;UBERON:0006241!2.43e-07!57;UBERON:0007135!2.43e-07!57;UBERON:0002300!2.52e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.51e-17;4!UBERON:0005629;4.09e-11;2!UBERON:0005358;4.09e-11;2!UBERON:0001886;4.09e-11;2!UBERON:0004086;4.09e-11;2!UBERON:0005282;4.09e-11;2!UBERON:0005281;4.09e-11;2!UBERON:0001896;5.01e-08;3!UBERON:0005290;5.01e-08;3!UBERON:0002114;6.13e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.82e-17,4;UBERON:0005629,4.52e-11,2;UBERON:0005358,4.52e-11,2;UBERON:0001886,4.52e-11,2;UBERON:0004086,4.52e-11,2;UBERON:0005282,4.52e-11,2;UBERON:0005281,4.52e-11,2;UBERON:0001896,5.18e-08,3;UBERON:0005290,5.18e-08,3;UBERON:0010096,5.18e-08,3;UBERON:0002114,6.78e-08,2 | |||
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|short_description=p@chr2:108905063..108905076,- | |short_description=p@chr2:108905063..108905076,- | ||
}} | }} |
Latest revision as of 23:04, 28 July 2015
Short description: | p@chr2:108905063..108905076, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:108905063..108905076, - |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 6.31e-21 | 1 |
seromucus secreting cell | 3.70e-11 | 2 |
fibroblast of choroid plexus | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 8.82e-17 | 4 |
vascular plexus | 4.52e-11 | 2 |
ventricle of nervous system | 4.52e-11 | 2 |
choroid plexus | 4.52e-11 | 2 |
brain ventricle | 4.52e-11 | 2 |
ventricular system of brain | 4.52e-11 | 2 |
ventricular system of central nervous system | 4.52e-11 | 2 |
medulla oblongata | 5.18e-08 | 3 |
myelencephalon | 5.18e-08 | 3 |
future myelencephalon | 5.18e-08 | 3 |
duodenum | 6.78e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.31e-21 | 1 |