FFCP PHASE1:Hg19::chr2:135470798..135470814,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:135470798..135470814,- | |||
|coexpression_cluster_id=C4128 | |coexpression_cluster_id=C4128 | ||
|description=CAGE_peak_at_chr2:135470798..135470814,- | |description=CAGE_peak_at_chr2:135470798..135470814,- | ||
|id=chr2:135470798..135470814,- | |id=chr2:135470798..135470814,- | ||
|ontology_enrichment_celltype=CL:0000763!1.02e-11!112;CL:0000049!1.02e-11!112;CL:0000037!1.69e-07!172;CL:0000566!1.69e-07!172;CL:0002032!2.59e-07!165;CL:0000837!2.59e-07!165 | |ontology_enrichment_celltype=CL:0000763!1.02e-11!112;CL:0000049!1.02e-11!112;CL:0000037!1.69e-07!172;CL:0000566!1.69e-07!172;CL:0002032!2.59e-07!165;CL:0000837!2.59e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000037;1.48e-12;1!CL:0001024;1.48e-12;1!CL:0000763;5.16e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.76e-13,108;CL:0000049,5.76e-13,108;CL:0001024,1.57e-12,1;CL:0000037,3.02e-09,168;CL:0000988,1.11e-08,177;CL:0002032,3.72e-08,161;CL:0000837,3.72e-08,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.60e-14!31;DOID:1240!1.40e-12!39;DOID:2531!8.10e-09!51;DOID:0060083!8.10e-09!51 | |ontology_enrichment_disease=DOID:8692!1.60e-14!31;DOID:1240!1.40e-12!39;DOID:2531!8.10e-09!51;DOID:0060083!8.10e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.19e-31;31!DOID:1240;4.79e-22;39!DOID:2531;1.58e-14;51!DOID:0060083;1.58e-14;51!DOID:9119;3.85e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.39e-34,31;DOID:1240,3.03e-27,39;DOID:2531,1.53e-20,51;DOID:0060083,1.53e-20,51;DOID:9119,3.08e-12,1;DOID:0050686,9.62e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-09!57;UBERON:0005068!1.06e-09!57;UBERON:0006241!1.06e-09!57;UBERON:0007135!1.06e-09!57;UBERON:0003076!4.20e-08!15;UBERON:0003057!4.20e-08!15;UBERON:0007023!7.41e-08!115;UBERON:0002616!6.42e-07!59 | |ontology_enrichment_uberon=UBERON:0001049!1.06e-09!57;UBERON:0005068!1.06e-09!57;UBERON:0006241!1.06e-09!57;UBERON:0007135!1.06e-09!57;UBERON:0003076!4.20e-08!15;UBERON:0003057!4.20e-08!15;UBERON:0007023!7.41e-08!115;UBERON:0002616!6.42e-07!59 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,4.69760702935756,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0.575384784644301,1.0246428261164,0.47296445977717,0,0,0,0,0,0,0,0,0,1.31940520074686,0.797854630486527,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,5.04457706683382,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,5.93666647410337,15.0288243733957,0.324621940274555,5.05434920604226,0,0,2.50634477090067,9.48033955688978,0,0,0,0,0,0,0,2.9308214310306,0,0,2.97501246323581,1.6653598399891,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,4.86638794824577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,4.69760702935756,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0.575384784644301,1.0246428261164,0.47296445977717,0,0,0,0,0,0,0,0,0,1.31940520074686,0.797854630486527,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,5.04457706683382,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,5.93666647410337,15.0288243733957,0.324621940274555,5.05434920604226,0,0,2.50634477090067,9.48033955688978,0,0,0,0,0,0,0,2.9308214310306,0,0,2.97501246323581,1.6653598399891,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,4.86638794824577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:135470798..135470814,- | |short_description=p@chr2:135470798..135470814,- | ||
}} | }} |
Latest revision as of 00:31, 29 July 2015
Short description: | p@chr2:135470798..135470814, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:135470798..135470814, - |
Coexpression cluster: | C4128_acute_CD34_CD133_chronic_biphenotypic_granulocyte_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.76e-13 | 108 |
common myeloid progenitor | 5.76e-13 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.57e-12 | 1 |
hematopoietic stem cell | 3.02e-09 | 168 |
hematopoietic cell | 1.11e-08 | 177 |
hematopoietic oligopotent progenitor cell | 3.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.72e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.39e-34 | 31 |
leukemia | 3.03e-27 | 39 |
hematologic cancer | 1.53e-20 | 51 |
immune system cancer | 1.53e-20 | 51 |
acute myeloid leukemia | 3.08e-12 | 1 |
organ system cancer | 9.62e-07 | 137 |