FFCP PHASE1:Hg19::chr2:161014257..161014260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:161014257..161014260,- | |||
|description=CAGE_peak_at_chr2:161014257..161014260,- | |description=CAGE_peak_at_chr2:161014257..161014260,- | ||
|id=chr2:161014257..161014260,- | |id=chr2:161014257..161014260,- | ||
|ontology_enrichment_celltype=CL:0002076!4.28e-12!43;CL:0000223!8.78e-08!59 | |ontology_enrichment_celltype=CL:0002076!4.28e-12!43;CL:0000223!8.78e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002621;3.58e-23;3!CL:0002541;1.08e-10;3!CL:0002076;3.99e-10;42!CL:1001319;1.22e-08;1!CL:1000600;1.22e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.59e-23,3;CL:0002076,1.58e-10,42;CL:0002541,1.95e-10,3;CL:1001319,2.22e-08,1;CL:1000600,2.22e-08,1;CL:0000223,2.58e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.01e-09!169;UBERON:0000925!1.01e-09!169;UBERON:0006595!1.01e-09!169;UBERON:0005911!1.88e-07!82;UBERON:0001007!2.26e-07!155;UBERON:0001555!2.26e-07!155;UBERON:0007026!2.26e-07!155;UBERON:0005631!3.38e-07!14;UBERON:0000158!3.38e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.58e-23;3!UBERON:0000486;2.39e-15;12!UBERON:0003350;3.71e-15;8!UBERON:0005631;4.48e-12;10!UBERON:0000158;4.48e-12;10!UBERON:0003124;1.08e-10;3!UBERON:0000920;1.08e-10;3!UBERON:0003929;2.98e-10;7!UBERON:0003729;2.16e-09;13!UBERON:0000344;3.85e-09;20!UBERON:0001828;4.95e-09;8!UBERON:0004923;5.28e-09;55!UBERON:0007029;1.22e-08;1!UBERON:0004645;1.22e-08;1!UBERON:0002171;1.22e-08;1!UBERON:0004913;1.22e-08;1!UBERON:0003703;1.22e-08;1!UBERON:0006518;1.22e-08;1!UBERON:0008949;1.22e-08;1!UBERON:0000101;1.22e-08;1!UBERON:0001256;1.22e-08;1!UBERON:0002167;1.22e-08;1!UBERON:0001259;1.22e-08;1!UBERON:0001174;1.22e-08;1!UBERON:0004914;1.22e-08;1!UBERON:0000365;9.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.59e-23,3;UBERON:0003350,4.98e-15,8;UBERON:0000920,1.95e-10,3;UBERON:0004923,1.67e-09,66;UBERON:0003729,1.90e-09,13;UBERON:0000161,2.19e-09,36;UBERON:0000344,4.00e-09,20;UBERON:0001828,4.96e-09,8;UBERON:0002171,1.05e-08,1;UBERON:0006518,1.05e-08,1;UBERON:0008949,1.05e-08,1;UBERON:0000101,1.05e-08,1;UBERON:0002167,1.05e-08,1;UBERON:0005631,1.40e-08,14;UBERON:0000158,1.40e-08,14;UBERON:0004913,1.53e-08,1;UBERON:0003703,1.53e-08,1;UBERON:0001174,1.53e-08,1;UBERON:0004914,1.53e-08,1;UBERON:0007029,1.65e-08,1;UBERON:0004645,2.22e-08,1;UBERON:0001256,2.22e-08,1;UBERON:0001259,2.22e-08,1;UBERON:0000166,2.29e-08,22;UBERON:0005911,1.89e-07,82;UBERON:0001004,7.20e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.27662058195258,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,1.58891016975863,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,2.31913023795956,1.63647672354501,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,0.283550194484773,0.179117045405697,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,8.02025881213139,0.828728900423067,0,0,0,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.661139661443912,0.768760269460425,3.95599408733211,0,0,0.31481234683064,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.188287601553558,0.43050537267123,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,1.67121139316383,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.591860433821602,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.1137934482855,2.03402920234213,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,1.27600463892768,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.265372693510018,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.870592065804026,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0.195551382734803,0,0,0,0.432271251462318,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0.86686278029118,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.427149650270779,2.67247318669432,1.65695622138878,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0.265841714557995,0,1.50257608997218,0.761610424337591,0,0.181848659202559,0,0,0,0.800055529326307,0,0,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0.926404341482917,0.877136198314828,0,0.771656153083659,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76665893301846,0.235939446695481,0,0,0,0,0,0,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0.992422356778588,0,0.894336993477167,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,4.582137370881,0,0.955538938977433,0,0,0,0,0.307988420568741,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0.463044948647668,0.437119121007915,0.470317296361523,0.490296643507811,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,0,0.320965466756673,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.639701945702943,0.714193294391221,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0.653150243690884,1.71116650542641,0.0673520530145875,0.215166616178029,0.332660356546013,1.05824249194267,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr2:161014257..161014260,- | |short_description=p@chr2:161014257..161014260,- | ||
}} | }} |
Latest revision as of 01:49, 29 July 2015
Short description: | p@chr2:161014257..161014260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:161014257..161014260, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.59e-23 | 3 |
endo-epithelial cell | 1.58e-10 | 42 |
chorionic membrane mesenchymal stem cell | 1.95e-10 | 3 |
bladder cell | 2.22e-08 | 1 |
lower urinary tract cell | 2.22e-08 | 1 |
endodermal cell | 2.58e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.59e-23 | 3 |
epithelium of mucosa | 4.98e-15 | 8 |
egg chorion | 1.95e-10 | 3 |
organ component layer | 1.67e-09 | 66 |
mouth mucosa | 1.90e-09 | 13 |
orifice | 2.19e-09 | 36 |
mucosa | 4.00e-09 | 20 |
gingiva | 4.96e-09 | 8 |
lower lobe of right lung | 1.05e-08 | 1 |
right lung lobe | 1.05e-08 | 1 |
lower lobe of lung | 1.05e-08 | 1 |
lobe of lung | 1.05e-08 | 1 |
right lung | 1.05e-08 | 1 |
extraembryonic membrane | 1.40e-08 | 14 |
membranous layer | 1.40e-08 | 14 |
hepatopancreatic ampulla | 1.53e-08 | 1 |
extrahepatic bile duct | 1.53e-08 | 1 |
common bile duct | 1.53e-08 | 1 |
duodenal papilla | 1.53e-08 | 1 |
surface | 1.65e-08 | 1 |
urinary bladder urothelium | 2.22e-08 | 1 |
wall of urinary bladder | 2.22e-08 | 1 |
mucosa of urinary bladder | 2.22e-08 | 1 |
oral opening | 2.29e-08 | 22 |
endo-epithelium | 1.89e-07 | 82 |
respiratory system | 7.20e-07 | 74 |