FFCP PHASE1:Hg19::chr2:162276951..162276955,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:162276951..162276955,+ | |||
|coexpression_cluster_id=C1619 | |||
|description=CAGE_peak_at_chr2:162276951..162276955,+ | |||
|id=chr2:162276951..162276955,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.90e-12;2!CL:0002319;5.24e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.68e-12,8;CL:0002319,5.64e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.19e-58!20;UBERON:0002619!7.36e-53!22;UBERON:0000956!3.64e-46!25;UBERON:0000203!3.64e-46!25;UBERON:0001869!1.43e-43!32;UBERON:0001893!9.39e-41!34;UBERON:0002791!5.59e-38!33;UBERON:0002020!9.71e-37!34;UBERON:0003528!9.71e-37!34;UBERON:0002780!2.72e-36!41;UBERON:0001890!2.72e-36!41;UBERON:0006240!2.72e-36!41;UBERON:0003080!2.61e-35!42;UBERON:0001049!1.19e-24!57;UBERON:0005068!1.19e-24!57;UBERON:0006241!1.19e-24!57;UBERON:0007135!1.19e-24!57;UBERON:0001017!1.20e-24!82;UBERON:0002616!1.24e-23!59;UBERON:0000955!2.71e-23!69;UBERON:0006238!2.71e-23!69;UBERON:0005743!3.35e-23!86;UBERON:0003056!1.10e-22!61;UBERON:0000200!2.63e-21!6;UBERON:0000073!2.16e-20!94;UBERON:0001016!2.16e-20!94;UBERON:0002021!1.77e-18!5;UBERON:0001872!2.35e-18!5;UBERON:0003075!4.77e-16!86;UBERON:0007284!4.77e-16!86;UBERON:0001871!1.02e-15!7;UBERON:0002346!4.39e-15!90;UBERON:0000153!6.38e-12!129;UBERON:0007811!6.38e-12!129;UBERON:0000033!1.08e-11!123;UBERON:0007023!1.16e-11!115;UBERON:0002771!3.47e-11!3;UBERON:0004121!2.75e-10!169;UBERON:0000924!6.78e-10!173;UBERON:0006601!6.78e-10!173;UBERON:0001870!1.60e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;4.97e-40;5!UBERON:0001950;2.67e-26;20!UBERON:0002619;4.81e-24;22!UBERON:0000956;2.62e-21;25!UBERON:0000203;2.62e-21;25!UBERON:0002791;9.20e-16;32!UBERON:0001869;1.80e-15;32!UBERON:0003528;1.02e-13;34!UBERON:0002020;1.02e-13;34!UBERON:0001893;1.50e-13;34!UBERON:0002780;5.70e-11;41!UBERON:0001890;5.70e-11;41!UBERON:0001016;2.83e-09;83!UBERON:0001017;7.73e-08;75!UBERON:0000073;3.83e-07;53!UBERON:0002616;3.83e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.35e-40,5;UBERON:0001950,2.22e-26,20;UBERON:0002619,4.07e-24,22;UBERON:0000956,2.26e-21,25;UBERON:0000203,2.26e-21,25;UBERON:0002791,6.71e-17,32;UBERON:0001869,6.71e-17,32;UBERON:0001017,8.89e-17,81;UBERON:0003528,5.99e-16,34;UBERON:0002020,5.99e-16,34;UBERON:0001893,5.99e-16,34;UBERON:0001016,4.02e-15,89;UBERON:0002780,2.50e-13,41;UBERON:0001890,2.50e-13,41;UBERON:0003080,2.50e-13,41;UBERON:0006240,2.50e-13,41;UBERON:0000955,2.15e-11,68;UBERON:0006238,2.15e-11,68;UBERON:0000073,2.08e-10,53;UBERON:0002616,2.08e-10,53;UBERON:0001049,7.23e-10,56;UBERON:0005068,7.23e-10,56;UBERON:0006241,7.23e-10,56;UBERON:0007135,7.23e-10,56;UBERON:0003056,4.40e-09,61;UBERON:0004121,7.12e-08,171;UBERON:0000924,7.12e-08,171;UBERON:0006601,7.12e-08,171;UBERON:0003075,8.29e-07,82;UBERON:0007284,8.29e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.569261198172555,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,1.53036380815245,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0.240476460754601,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.3755727921195,0,0,0,5.94899130225792,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.578063025868136,1.41696576325585,1.43670473151436,0.41023272848151,3.02486035466062,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0.781078098613847,0.413373593002368,0.507326481551255,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0,0.855046056317038,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475940431336403,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:162276951..162276955,+ | |||
}} |
Latest revision as of 01:54, 29 July 2015
Short description: | p@chr2:162276951..162276955, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162276951..162276955, + |
Coexpression cluster: | C1619_medulloblastoma_occipital_duodenum_Neural_parietal_temporal_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.68e-12 | 8 |
neural cell | 5.64e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.35e-40 | 5 |
neocortex | 2.22e-26 | 20 |
regional part of cerebral cortex | 4.07e-24 | 22 |
cerebral cortex | 2.26e-21 | 25 |
pallium | 2.26e-21 | 25 |
regional part of telencephalon | 6.71e-17 | 32 |
cerebral hemisphere | 6.71e-17 | 32 |
central nervous system | 8.89e-17 | 81 |
brain grey matter | 5.99e-16 | 34 |
gray matter | 5.99e-16 | 34 |
telencephalon | 5.99e-16 | 34 |
nervous system | 4.02e-15 | 89 |
regional part of forebrain | 2.50e-13 | 41 |
forebrain | 2.50e-13 | 41 |
anterior neural tube | 2.50e-13 | 41 |
future forebrain | 2.50e-13 | 41 |
brain | 2.15e-11 | 68 |
future brain | 2.15e-11 | 68 |
regional part of nervous system | 2.08e-10 | 53 |
regional part of brain | 2.08e-10 | 53 |
neural tube | 7.23e-10 | 56 |
neural rod | 7.23e-10 | 56 |
future spinal cord | 7.23e-10 | 56 |
neural keel | 7.23e-10 | 56 |
pre-chordal neural plate | 4.40e-09 | 61 |
ectoderm-derived structure | 7.12e-08 | 171 |
ectoderm | 7.12e-08 | 171 |
presumptive ectoderm | 7.12e-08 | 171 |
neural plate | 8.29e-07 | 82 |
presumptive neural plate | 8.29e-07 | 82 |