FFCP PHASE1:Hg19::chr2:198530770..198530773,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:198530770..198530773,- | |||
|coexpression_cluster_id=C3672 | |||
|description=CAGE_peak_at_chr2:198530770..198530773,- | |description=CAGE_peak_at_chr2:198530770..198530773,- | ||
|id=chr2:198530770..198530773,- | |id=chr2:198530770..198530773,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.83e-39!57;UBERON:0005068!7.83e-39!57;UBERON:0006241!7.83e-39!57;UBERON:0007135!7.83e-39!57;UBERON:0002616!3.40e-31!59;UBERON:0002346!1.38e-28!90;UBERON:0002020!4.34e-28!34;UBERON:0003528!4.34e-28!34;UBERON:0000955!1.10e-27!69;UBERON:0006238!1.10e-27!69;UBERON:0001017!8.05e-27!82;UBERON:0002780!1.32e-25!41;UBERON:0001890!1.32e-25!41;UBERON:0006240!1.32e-25!41;UBERON:0005743!2.74e-25!86;UBERON:0002791!3.32e-25!33;UBERON:0003080!6.63e-25!42;UBERON:0001893!2.26e-24!34;UBERON:0003075!1.17e-23!86;UBERON:0007284!1.17e-23!86;UBERON:0000073!2.62e-22!94;UBERON:0001016!2.62e-22!94;UBERON:0001869!9.18e-20!32;UBERON:0000033!3.90e-17!123;UBERON:0000153!4.91e-16!129;UBERON:0007811!4.91e-16!129;UBERON:0003056!6.80e-16!61;UBERON:0002308!1.11e-15!9;UBERON:0000125!1.11e-15!9;UBERON:0000956!1.40e-15!25;UBERON:0000203!1.40e-15!25;UBERON:0003076!2.38e-15!15;UBERON:0003057!2.38e-15!15;UBERON:0002619!7.81e-15!22;UBERON:0007023!7.92e-15!115;UBERON:0000924!1.60e-14!173;UBERON:0006601!1.60e-14!173;UBERON:0001950!2.84e-13!20;UBERON:0006331!7.46e-13!3;UBERON:0000988!1.97e-12!3;UBERON:0002771!2.39e-12!3;UBERON:0002298!2.91e-12!8;UBERON:0004121!1.18e-11!169;UBERON:0002420!3.84e-11!9;UBERON:0007245!3.84e-11!9;UBERON:0010009!3.84e-11!9;UBERON:0010011!3.84e-11!9;UBERON:0000454!3.84e-11!9;UBERON:0004733!5.35e-11!12;UBERON:0002028!5.35e-11!12;UBERON:0007277!5.35e-11!12;UBERON:0002680!1.84e-10!9;UBERON:0001895!1.84e-10!9;UBERON:0010092!1.84e-10!9;UBERON:0004732!4.23e-10!13;UBERON:0001897!1.78e-09!2;UBERON:0009663!1.79e-09!7;UBERON:0001875!2.66e-09!2;UBERON:0006514!2.66e-09!2;UBERON:0002148!4.82e-09!2;UBERON:0009662!4.82e-09!2;UBERON:0000025!1.16e-08!194;UBERON:0001871!4.46e-08!7;UBERON:0004111!9.39e-08!241;UBERON:0000477!2.20e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;6.43e-131;2!UBERON:0010225;6.43e-131;2!UBERON:0002784;2.83e-66;4!UBERON:0001894;1.64e-38;7!UBERON:0001875;5.96e-34;2!UBERON:0006514;5.96e-34;2!UBERON:0002780;7.07e-12;41!UBERON:0001890;7.07e-12;41!UBERON:0009663;9.43e-11;7!UBERON:0000073;4.63e-09;53!UBERON:0002616;4.63e-09;53!UBERON:0002420;1.16e-08;9!UBERON:0000125;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0002308;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,4.61e-131,2;UBERON:0010225,4.61e-131,2;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0001875,7.05e-34,2;UBERON:0006514,7.05e-34,2;UBERON:0002780,3.52e-15,41;UBERON:0001890,3.52e-15,41;UBERON:0003080,3.52e-15,41;UBERON:0006240,3.52e-15,41;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0009663,9.89e-11,7;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002420,1.21e-08,9;UBERON:0000125,1.21e-08,9;UBERON:0007245,1.21e-08,9;UBERON:0002308,1.21e-08,9;UBERON:0010009,1.21e-08,9;UBERON:0010011,1.21e-08,9;UBERON:0000454,1.21e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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| ||
|short_description=p@chr2:198530770..198530773,- | |short_description=p@chr2:198530770..198530773,- | ||
}} | }} |
Latest revision as of 04:43, 29 July 2015
Short description: | p@chr2:198530770..198530773, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:198530770..198530773, - |
Coexpression cluster: | C3672_thalamus_globus_substantia_medulla_middle_locus_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 4.61e-131 | 2 |
thalamic complex | 4.61e-131 | 2 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
globus pallidus | 7.05e-34 | 2 |
pallidum | 7.05e-34 | 2 |
regional part of forebrain | 3.52e-15 | 41 |
forebrain | 3.52e-15 | 41 |
anterior neural tube | 3.52e-15 | 41 |
future forebrain | 3.52e-15 | 41 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
telencephalic nucleus | 9.89e-11 | 7 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
basal ganglion | 1.21e-08 | 9 |
neural nucleus | 1.21e-08 | 9 |
nuclear complex of neuraxis | 1.21e-08 | 9 |
nucleus of brain | 1.21e-08 | 9 |
aggregate regional part of brain | 1.21e-08 | 9 |
collection of basal ganglia | 1.21e-08 | 9 |
cerebral subcortex | 1.21e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |