FFCP PHASE1:Hg19::chr2:216226715..216226720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216226715..216226720,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_at_chr2:216226715..216226720,- | |description=CAGE_peak_at_chr2:216226715..216226720,- | ||
|id=chr2:216226715..216226720,- | |id=chr2:216226715..216226720,- | ||
|ontology_enrichment_celltype=CL:0002541;3.26e-09;3!CL:0000511;1.80e-07;1!CL:0002625;1.80e-07;1!CL:0000216;1.80e-07;1!CL:0000228;5.44e-07;1!CL:0000222;5.44e-07;1!CL:0002372;5.44e-07;1!CL:1000306;9.19e-07;4!CL:0002547;9.19e-07;4 | |ontology_enrichment_celltype=CL:0000055!8.82e-17!180;CL:0000057!1.85e-13!75;CL:0002620!6.98e-12!23;CL:0000183!3.45e-09!59;CL:0000048!3.48e-09!430;CL:0000680!5.20e-09!57;CL:0000056!5.20e-09!57;CL:0000355!5.20e-09!57;CL:0000723!1.11e-08!436;CL:0000034!4.83e-08!444;CL:0002371!1.58e-07!591;CL:0000187!2.31e-07!54;CL:0000144!8.73e-07!625 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;3.26e-09;3!CL:0000511;1.80e-07;1!CL:0002625;1.80e-07;1!CL:0000216;1.80e-07;1!CL:0000228;5.44e-07;1!CL:0000222;5.44e-07;1!CL:0002372;5.44e-07;1!CL:1000306;9.19e-07;4!CL:0002547;9.19e-07;4 | ||
|ontology_enrichment_disease=DOID:2513;5.44e-07;1!DOID:4235;5.44e-07;1!DOID:3571;5.44e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0002541,3.27e-09,3;CL:0000511,1.86e-07,1;CL:0002625,1.86e-07,1;CL:0000216,1.86e-07,1;CL:0000228,4.06e-07,1;CL:0002372,4.06e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0005631;1.17e-09;10!UBERON:0000158;1.17e-09;10!UBERON:0003124;3.26e-09;3!UBERON:0000920;3.26e-09;3!UBERON:0001136;1.80e-07;1!UBERON:0001343;1.80e-07;1!UBERON:0004910;1.80e-07;1!UBERON:0004813;1.80e-07;1!UBERON:0007195;2.22e-07;1!UBERON:0004797;9.19e-07;4!UBERON:0000415;9.19e-07;4!UBERON:0007240;9.19e-07;4!UBERON:0005742;9.19e-07;4!UBERON:0005734;9.19e-07;4!UBERON:0004664;9.19e-07;4!UBERON:0004663;9.19e-07;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;5.44e-07;1!DOID:4235;5.44e-07;1!DOID:3571;5.44e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,2.67e-07,1;DOID:2513,3.60e-07,1;DOID:3571,3.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.39e-10!70;UBERON:0005256!1.16e-09!143;UBERON:0000914!2.00e-09!83;UBERON:0002329!2.00e-09!83;UBERON:0003077!2.00e-09!83;UBERON:0003059!2.00e-09!83;UBERON:0007282!2.00e-09!83;UBERON:0009618!2.00e-09!83;UBERON:0007285!2.00e-09!83;UBERON:0000486!8.26e-09!82;UBERON:0002199!1.26e-08!45;UBERON:0002416!1.26e-08!45;UBERON:0002097!1.48e-08!40;UBERON:0001134!6.16e-08!61;UBERON:0002036!6.16e-08!61;UBERON:0003082!6.16e-08!61;UBERON:0002385!1.85e-07!63;UBERON:0001015!1.85e-07!63;UBERON:0000383!1.85e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.17e-09;10!UBERON:0000158;1.17e-09;10!UBERON:0003124;3.26e-09;3!UBERON:0000920;3.26e-09;3!UBERON:0001136;1.80e-07;1!UBERON:0001343;1.80e-07;1!UBERON:0004910;1.80e-07;1!UBERON:0004813;1.80e-07;1!UBERON:0007195;2.22e-07;1!UBERON:0004797;9.19e-07;4!UBERON:0000415;9.19e-07;4!UBERON:0007240;9.19e-07;4!UBERON:0005742;9.19e-07;4!UBERON:0005734;9.19e-07;4!UBERON:0004664;9.19e-07;4!UBERON:0004663;9.19e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.27e-09,3;UBERON:0001136,1.86e-07,1;UBERON:0001343,1.86e-07,1;UBERON:0004910,1.86e-07,1;UBERON:0005154,1.86e-07,1;UBERON:0005295,1.86e-07,1;UBERON:0004813,1.86e-07,1;UBERON:0005297,1.86e-07,1;UBERON:0005294,1.86e-07,1;UBERON:0010141,1.86e-07,1;UBERON:0005891,1.86e-07,1;UBERON:0007195,2.23e-07,1;UBERON:0004871,5.28e-07,8;UBERON:0005631,7.23e-07,14;UBERON:0000158,7.23e-07,14 | |||
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|short_description=p@chr2:216226715..216226720,- | |short_description=p@chr2:216226715..216226720,- | ||
}} | }} |
Latest revision as of 05:59, 29 July 2015
Short description: | p@chr2:216226715..216226720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216226715..216226720, - |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.27e-09 | 3 |
androgen binding protein secreting cell | 1.86e-07 | 1 |
seminiferous tubule epithelial cell | 1.86e-07 | 1 |
Sertoli cell | 1.86e-07 | 1 |
multinucleate cell | 4.06e-07 | 1 |
myotube | 4.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.27e-09 | 3 |
mesothelium | 1.86e-07 | 1 |
seminiferous tubule of testis | 1.86e-07 | 1 |
epithelium of male gonad | 1.86e-07 | 1 |
epithelial cord | 1.86e-07 | 1 |
sex cord | 1.86e-07 | 1 |
seminiferous tubule epithelium | 1.86e-07 | 1 |
testis sex cord | 1.86e-07 | 1 |
genital ridge | 1.86e-07 | 1 |
primitive sex cord of indifferent gonad | 1.86e-07 | 1 |
coelomic epithelium | 1.86e-07 | 1 |
stroma of bone marrow | 2.23e-07 | 1 |
somatic layer of lateral plate mesoderm | 5.28e-07 | 8 |
extraembryonic membrane | 7.23e-07 | 14 |
membranous layer | 7.23e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.67e-07 | 1 |
basal cell carcinoma | 3.60e-07 | 1 |
liver cancer | 3.82e-07 | 1 |