FFCP PHASE1:Hg19::chr2:216253018..216253020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216253018..216253020,- | |||
|coexpression_cluster_id=C401 | |coexpression_cluster_id=C401 | ||
|description=CAGE_peak_at_chr2:216253018..216253020,- | |description=CAGE_peak_at_chr2:216253018..216253020,- | ||
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|ontology_enrichment_celltype=CL:0000055!3.18e-15!180;CL:0000057!2.58e-12!75;CL:0002371!1.14e-10!591;CL:0000048!3.17e-10!430;CL:0000723!5.05e-10!436;CL:0000034!2.73e-09!444;CL:0000144!9.82e-09!625;CL:0002570!1.96e-07!8 | |ontology_enrichment_celltype=CL:0000055!3.18e-15!180;CL:0000057!2.58e-12!75;CL:0002371!1.14e-10!591;CL:0000048!3.17e-10!430;CL:0000723!5.05e-10!436;CL:0000034!2.73e-09!444;CL:0000144!9.82e-09!625;CL:0002570!1.96e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000197;4.56e-19;6!CL:0000098;4.56e-19;6!CL:0002167;4.56e-19;6!CL:0002541;4.93e-11;3!CL:0000632;2.16e-10;3!CL:0002591;9.44e-09;1!CL:0000327;6.02e-08;15 | |ontology_enrichment_celltype_v019=CL:0000197;4.56e-19;6!CL:0000098;4.56e-19;6!CL:0002167;4.56e-19;6!CL:0002541;4.93e-11;3!CL:0000632;2.16e-10;3!CL:0002591;9.44e-09;1!CL:0000327;6.02e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.45e-19,6;CL:0000098,3.45e-19,6;CL:0002167,3.45e-19,6;CL:0002541,5.06e-11,3;CL:0000632,2.27e-10,3;CL:0002591,9.46e-09,1;CL:0000327,6.20e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;2.05e-08;1!DOID:4235;2.05e-08;1!DOID:3571;2.05e-08;1 | |ontology_enrichment_disease_v019=DOID:3369;2.05e-08;1!DOID:4235;2.05e-08;1!DOID:3571;2.05e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3369,1.27e-08,1;DOID:3571,3.28e-08,1;DOID:4235,4.07e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.93e-11;3!UBERON:0000920;4.93e-11;3!UBERON:0007195;2.05e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0003124;4.93e-11;3!UBERON:0000920;4.93e-11;3!UBERON:0007195;2.05e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.06e-11,3;UBERON:0007195,2.84e-08,1 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.791300934685361,0.123766352960047,0.662794751455832,0,1.20538905604795,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2568239576754,0.670700859703636,0.383587685530591,0.361439152384566,0.50133791063589,0.144846518960824,3.1811437882044,7.78615792484217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.794455084879313,0,0,0,1.06748995729705,0,0,0.404132016209064,0.490385709340376,0.605429710579726,4.60940739583999,0,0.624320153660641,0,0.298897361103602,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.0920498986422993,0.80823028409406,1.42003837006646,0.604512589365842,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,1.05667824812239,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.258543431515556,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.542530047399471,1.24782516918484,1.60586089917446,1.10391690523754,1.40569697991256,0,0,0,0.664225598535437,1.29058417979192,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0,0.896974044789907,0.511707249066704,0.482561763430822,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.116210378459959,0,0.601519410909855,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.647747748306418,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.429680979473094,0.290033387828457,0.170453254832202,0.178064071293475,0,0.192190067365106,0,0.50578890427775,0.464845549297286,1.88887408098384,0,0,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,1.28381696410176,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0,0.282810863907425,2.26016233240486,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,4.14701507651495,0.274792780205587,15.4580085045404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.201550417460179,1.08089965062721,1.16495949527454,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,0,0,0.251567901752575,0,0.228840068396924,0.756154618816195,0,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0.545545977607678,0.322231671127465,0,1.19428766609585,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.314531883711793,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.80682027481408,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.791300934685361,0.123766352960047,0.662794751455832,0,1.20538905604795,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2568239576754,0.670700859703636,0.383587685530591,0.361439152384566,0.50133791063589,0.144846518960824,3.1811437882044,7.78615792484217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.794455084879313,0,0,0,1.06748995729705,0,0,0.404132016209064,0.490385709340376,0.605429710579726,4.60940739583999,0,0.624320153660641,0,0.298897361103602,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.0920498986422993,0.80823028409406,1.42003837006646,0.604512589365842,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,1.05667824812239,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.258543431515556,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.542530047399471,1.24782516918484,1.60586089917446,1.10391690523754,1.40569697991256,0,0,0,0.664225598535437,1.29058417979192,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0,0.896974044789907,0.511707249066704,0.482561763430822,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.116210378459959,0,0.601519410909855,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.647747748306418,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.429680979473094,0.290033387828457,0.170453254832202,0.178064071293475,0,0.192190067365106,0,0.50578890427775,0.464845549297286,1.88887408098384,0,0,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,1.28381696410176,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0,0.282810863907425,2.26016233240486,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,4.14701507651495,0.274792780205587,15.4580085045404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.201550417460179,1.08089965062721,1.16495949527454,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,0,0,0.251567901752575,0,0.228840068396924,0.756154618816195,0,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0.545545977607678,0.322231671127465,0,1.19428766609585,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.314531883711793,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.80682027481408,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:216253018..216253020,- | |short_description=p@chr2:216253018..216253020,- | ||
}} | }} |
Latest revision as of 06:06, 29 July 2015
Short description: | p@chr2:216253018..216253020, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216253018..216253020, - |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.45e-19 | 6 |
sensory epithelial cell | 3.45e-19 | 6 |
olfactory epithelial cell | 3.45e-19 | 6 |
chorionic membrane mesenchymal stem cell | 5.06e-11 | 3 |
hepatic stellate cell | 2.27e-10 | 3 |
smooth muscle cell of the pulmonary artery | 9.46e-09 | 1 |
extracellular matrix secreting cell | 6.20e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.06e-11 | 3 |
stroma of bone marrow | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.27e-08 | 1 |
liver cancer | 3.28e-08 | 1 |
spindle cell sarcoma | 4.07e-08 | 1 |