FFCP PHASE1:Hg19::chr2:217529109..217529123,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:217529109..217529123,+ | |||
|description=CAGE_peak_at_chr2:217529109..217529123,+ | |||
|id=chr2:217529109..217529123,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;5.94e-08;2!CL:0002536;5.94e-08;2!CL:0002549;5.94e-08;2!CL:1000398;5.94e-08;2!CL:0002575;5.94e-08;2!CL:1000487;5.94e-08;2!CL:0002367;5.94e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,4.09e-08,2;CL:0002575,4.38e-08,2;CL:0002536,5.02e-08,2;CL:0002262,5.74e-08,2;CL:1000398,5.74e-08,2;CL:0002549,8.04e-08,2;CL:0002367,9.19e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.75e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2513;4.71e-15;1!DOID:3451;3.56e-08;2!DOID:4159;3.56e-08;2!DOID:0060122;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.73e-15,1;DOID:3451,3.56e-08,2;DOID:4159,3.56e-08,2;DOID:0060122,3.56e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;1.42e-11;5!UBERON:0006876;1.85e-11;11!UBERON:0001281;5.94e-08;2!UBERON:0003497;5.94e-08;2!UBERON:0003909;5.94e-08;2!UBERON:0005629;5.94e-08;2!UBERON:0003835;5.94e-08;2!UBERON:0005358;5.94e-08;2!UBERON:0005969;5.94e-08;2!UBERON:0001886;5.94e-08;2!UBERON:0004086;5.94e-08;2!UBERON:0005282;5.94e-08;2!UBERON:0005281;5.94e-08;2!UBERON:0003956;5.94e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,2.17e-11,5;UBERON:0006876,3.11e-11,11;UBERON:0001281,5.74e-08,2;UBERON:0003497,5.74e-08,2;UBERON:0003909,5.74e-08,2;UBERON:0003835,5.74e-08,2;UBERON:0005629,8.04e-08,2;UBERON:0005358,8.04e-08,2;UBERON:0001886,8.04e-08,2;UBERON:0004086,8.04e-08,2;UBERON:0005282,8.04e-08,2;UBERON:0005281,8.04e-08,2;UBERON:0005969,9.19e-08,2;UBERON:0003956,9.19e-08,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,1.52908960491121,0.263766978228454,0,0,0,0,0,0,0.861847406537515,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21085942115945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2931684545505,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0.651616610620649,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0.24538298343828,0,0,1.45579603071565,0.892144943985809,0.473107245101804,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,1.56640925970192,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,1.2655176988749,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,1.9109987597118,0,0,0,0,0,0.578775534266688,0,0.811641507850816,0,0,0,0,0,0.354761064070598,0,0,1.13841952129715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0.159426272728822,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0.251932747854276,0.102268682502155,0,2.79935628895627,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0.439656701034247,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0.414706207840855,0.797525143673985,0,0.751288044986092,0.380805212168795,0.813741466409323,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0.169732529954025,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0.329821550236287,0.754814217833368,0,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0.322289439867886,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr2:217529109..217529123,+ | |||
}} |
Latest revision as of 06:25, 29 July 2015
Short description: | p@chr2:217529109..217529123, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217529109..217529123, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 4.09e-08 | 2 |
central nervous system pericyte | 4.38e-08 | 2 |
amniotic epithelial cell | 5.02e-08 | 2 |
endothelial cell of sinusoid | 5.74e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.74e-08 | 2 |
fibroblast of choroid plexus | 8.04e-08 | 2 |
trabecular meshwork cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 2.17e-11 | 5 |
vasculature of organ | 3.11e-11 | 11 |
hepatic sinusoid | 5.74e-08 | 2 |
abdomen blood vessel | 5.74e-08 | 2 |
sinusoid | 5.74e-08 | 2 |
abdominal segment blood vessel | 5.74e-08 | 2 |
vascular plexus | 8.04e-08 | 2 |
ventricle of nervous system | 8.04e-08 | 2 |
choroid plexus | 8.04e-08 | 2 |
brain ventricle | 8.04e-08 | 2 |
ventricular system of brain | 8.04e-08 | 2 |
ventricular system of central nervous system | 8.04e-08 | 2 |
reticulum trabeculare | 9.19e-08 | 2 |
aqueous drainage system | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.73e-15 | 1 |
skin carcinoma | 3.56e-08 | 2 |
skin cancer | 3.56e-08 | 2 |
integumentary system cancer | 3.56e-08 | 2 |