FFCP PHASE1:Hg19::chr2:228727656..228727664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:228727656..228727664,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_at_chr2:228727656..228727664,+ | |description=CAGE_peak_at_chr2:228727656..228727664,+ | ||
|id=chr2:228727656..228727664,+ | |id=chr2:228727656..228727664,+ | ||
|ontology_enrichment_celltype=CL:0000048!8.86e-14!430;CL:0000723!2.13e-13!436;CL:0000034!6.62e-13!444;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0000187!6.55e-08!54;CL:0002371!7.42e-08!591;CL:0000359!8.89e-08!32;CL:0002057!9.20e-08!42;CL:0002320!1.58e-07!365;CL:0000134!2.50e-07!358;CL:0000860!4.44e-07!45;CL:0000183!5.56e-07!59;CL:0000393!8.16e-07!60;CL:0000211!8.16e-07!60 | |ontology_enrichment_celltype=CL:0000048!8.86e-14!430;CL:0000723!2.13e-13!436;CL:0000034!6.62e-13!444;CL:0000680!1.45e-08!57;CL:0000056!1.45e-08!57;CL:0000355!1.45e-08!57;CL:0000187!6.55e-08!54;CL:0002371!7.42e-08!591;CL:0000359!8.89e-08!32;CL:0002057!9.20e-08!42;CL:0002320!1.58e-07!365;CL:0000134!2.50e-07!358;CL:0000860!4.44e-07!45;CL:0000183!5.56e-07!59;CL:0000393!8.16e-07!60;CL:0000211!8.16e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.39e-21;13!CL:0002581;1.12e-17;1!CL:0002591;1.12e-17;1!CL:0002593;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.12e-18,15;CL:0002581,7.37e-18,1;CL:0002591,1.22e-17,1;CL:0002593,2.02e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.93e-07!14 | |ontology_enrichment_disease=DOID:2394!2.93e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.69e-08!167;UBERON:0001637!4.37e-08!42;UBERON:0003509!4.37e-08!42;UBERON:0004572!4.37e-08!42;UBERON:0001134!8.80e-08!61;UBERON:0002036!8.80e-08!61;UBERON:0003082!8.80e-08!61;UBERON:0003081!1.23e-07!216;UBERON:0004872!1.86e-07!84;UBERON:0002385!1.98e-07!63;UBERON:0001015!1.98e-07!63;UBERON:0000383!1.98e-07!63;UBERON:0002384!4.82e-07!375;UBERON:0003914!5.49e-07!118;UBERON:0007497!5.51e-07!2;UBERON:0003643!5.51e-07!2;UBERON:0003504!5.51e-07!2;UBERON:0003469!5.51e-07!2;UBERON:0003496!5.51e-07!2;UBERON:0004797!5.51e-07!2;UBERON:0002012!5.51e-07!2;UBERON:0008886!5.51e-07!2;UBERON:0007303!5.51e-07!2;UBERON:0002061!5.51e-07!2;UBERON:0005432!5.51e-07!2;UBERON:0004363!5.51e-07!2 | |ontology_enrichment_uberon=UBERON:0002204!1.69e-08!167;UBERON:0001637!4.37e-08!42;UBERON:0003509!4.37e-08!42;UBERON:0004572!4.37e-08!42;UBERON:0001134!8.80e-08!61;UBERON:0002036!8.80e-08!61;UBERON:0003082!8.80e-08!61;UBERON:0003081!1.23e-07!216;UBERON:0004872!1.86e-07!84;UBERON:0002385!1.98e-07!63;UBERON:0001015!1.98e-07!63;UBERON:0000383!1.98e-07!63;UBERON:0002384!4.82e-07!375;UBERON:0003914!5.49e-07!118;UBERON:0007497!5.51e-07!2;UBERON:0003643!5.51e-07!2;UBERON:0003504!5.51e-07!2;UBERON:0003469!5.51e-07!2;UBERON:0003496!5.51e-07!2;UBERON:0004797!5.51e-07!2;UBERON:0002012!5.51e-07!2;UBERON:0008886!5.51e-07!2;UBERON:0007303!5.51e-07!2;UBERON:0002061!5.51e-07!2;UBERON:0005432!5.51e-07!2;UBERON:0004363!5.51e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.64e-09;2!UBERON:0002012;1.64e-09;2!UBERON:0005406;1.64e-09;2!UBERON:0002456;1.64e-09;2!UBERON:0008886;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.33e-09,2;UBERON:0000078,1.71e-09,2;UBERON:0007497,1.71e-09,2;UBERON:0003643,1.71e-09,2;UBERON:0003504,1.71e-09,2;UBERON:0003469,1.71e-09,2;UBERON:0003496,1.71e-09,2;UBERON:0002012,1.71e-09,2;UBERON:0008886,1.71e-09,2;UBERON:0007303,1.71e-09,2;UBERON:0002061,1.71e-09,2;UBERON:0005432,1.71e-09,2;UBERON:0004363,1.71e-09,2;UBERON:0002456,2.02e-09,2;UBERON:0004145,9.64e-07,3 | |||
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| ||
|short_description=p@chr2:228727656..228727664,+ | |short_description=p@chr2:228727656..228727664,+ | ||
}} | }} |
Latest revision as of 07:24, 29 July 2015
Short description: | p@chr2:228727656..228727664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:228727656..228727664, + |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.12e-18 | 15 |
perirenal preadipocyte | 7.37e-18 | 1 |
smooth muscle cell of the pulmonary artery | 1.22e-17 | 1 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.33e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.71e-09 | 2 |
developing epithelial placode | 1.71e-09 | 2 |
respiratory system arterial blood vessel | 1.71e-09 | 2 |
respiratory system blood vessel | 1.71e-09 | 2 |
respiratory system artery | 1.71e-09 | 2 |
head blood vessel | 1.71e-09 | 2 |
pulmonary artery | 1.71e-09 | 2 |
pulmonary vascular system | 1.71e-09 | 2 |
pharyngeal vasculature | 1.71e-09 | 2 |
truncus arteriosus | 1.71e-09 | 2 |
aortic sac | 1.71e-09 | 2 |
pharyngeal arch artery | 1.71e-09 | 2 |
internal thoracic artery | 2.02e-09 | 2 |
outflow tract | 9.64e-07 | 3 |