FFCP PHASE1:Hg19::chr2:29220943..29220956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29220943..29220956,+ | |||
|coexpression_cluster_id=C695 | |coexpression_cluster_id=C695 | ||
|description=CAGE_peak_at_chr2:29220943..29220956,+ | |description=CAGE_peak_at_chr2:29220943..29220956,+ | ||
|id=chr2:29220943..29220956,+ | |id=chr2:29220943..29220956,+ | ||
|ontology_enrichment_celltype=CL:0000840!9.04e-16!5;CL:0001029!9.04e-16!5;CL:0001014!1.85e-12!2;CL:0001016!1.85e-12!2;CL:0000990!7.58e-11!8;CL:0000451!4.80e-09!10;CL:0002178!8.31e-09!3;CL:0000784!1.04e-08!3 | |ontology_enrichment_celltype=CL:0000840!9.04e-16!5;CL:0001029!9.04e-16!5;CL:0001014!1.85e-12!2;CL:0001016!1.85e-12!2;CL:0000990!7.58e-11!8;CL:0000451!4.80e-09!10;CL:0002178!8.31e-09!3;CL:0000784!1.04e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.34e-23!1;DOID:1357!1.34e-23!1 | |ontology_enrichment_disease=DOID:0050619!1.34e-23!1;DOID:1357!1.34e-23!1 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.34e-23!1;UBERON:0001825!1.34e-23!1;UBERON:0002336!6.40e-23!1;UBERON:0001018!6.40e-23!1;UBERON:0002473!6.40e-23!1;UBERON:0005340!6.40e-23!1;UBERON:0002316!6.40e-23!1;UBERON:0003544!6.40e-23!1;UBERON:0001020!6.40e-23!1;UBERON:0005970!6.40e-23!1;UBERON:0002437!6.40e-23!1;UBERON:0002148!2.59e-12!2;UBERON:0009662!2.59e-12!2;UBERON:0005162!3.62e-12!2;UBERON:0000122!3.62e-12!2;UBERON:0000988!1.21e-08!3;UBERON:0006331!1.21e-08!3 | |ontology_enrichment_uberon=UBERON:0001764!1.34e-23!1;UBERON:0001825!1.34e-23!1;UBERON:0002336!6.40e-23!1;UBERON:0001018!6.40e-23!1;UBERON:0002473!6.40e-23!1;UBERON:0005340!6.40e-23!1;UBERON:0002316!6.40e-23!1;UBERON:0003544!6.40e-23!1;UBERON:0001020!6.40e-23!1;UBERON:0005970!6.40e-23!1;UBERON:0002437!6.40e-23!1;UBERON:0002148!2.59e-12!2;UBERON:0009662!2.59e-12!2;UBERON:0005162!3.62e-12!2;UBERON:0000122!3.62e-12!2;UBERON:0000988!1.21e-08!3;UBERON:0006331!1.21e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p@chr2:29220943..29220956,+ | |short_description=p@chr2:29220943..29220956,+ | ||
}} | }} |
Latest revision as of 09:26, 29 July 2015
Short description: | p@chr2:29220943..29220956, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29220943..29220956, + |
Coexpression cluster: | C695_gastric_mesothelioma_amniotic_chorionic_Mast_tongue_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |