FFCP PHASE1:Hg19::chr2:45233049..45233071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:45233049..45233071,- | |||
|coexpression_cluster_id=C1906 | |coexpression_cluster_id=C1906 | ||
|description=CAGE_peak_at_chr2:45233049..45233071,- | |description=CAGE_peak_at_chr2:45233049..45233071,- | ||
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|ontology_enrichment_celltype=CL:0000153!5.62e-07!9;CL:0000447!5.62e-07!9 | |ontology_enrichment_celltype=CL:0000153!5.62e-07!9;CL:0000447!5.62e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002623;5.55e-09;3!CL:0000135;1.17e-08;3!CL:0000388;1.17e-08;3!CL:0002552;1.19e-08;5!CL:0000153;3.94e-07;9!CL:0000447;3.94e-07;9!CL:0002556;8.13e-07;6 | |ontology_enrichment_celltype_v019=CL:0002623;5.55e-09;3!CL:0000135;1.17e-08;3!CL:0000388;1.17e-08;3!CL:0002552;1.19e-08;5!CL:0000153;3.94e-07;9!CL:0000447;3.94e-07;9!CL:0002556;8.13e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,6.81e-09,3;CL:0000135,1.09e-08,3;CL:0000388,1.09e-08,3;CL:0002552,1.28e-08,5;CL:0000153,3.80e-07,9;CL:0000447,3.80e-07,9;CL:0002556,8.04e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.14e-11!72;UBERON:0000078!5.80e-09!18;UBERON:0000165!6.87e-08!28;UBERON:0000930!6.87e-08!28;UBERON:0000072!2.57e-07!46;UBERON:0001557!3.43e-07!19;UBERON:0001737!4.74e-07!9;UBERON:0000065!5.01e-07!53;UBERON:0001044!6.17e-07!6;UBERON:0003293!6.17e-07!6;UBERON:0003294!6.17e-07!6;UBERON:0010047!6.17e-07!6;UBERON:0000167!6.17e-07!6 | |ontology_enrichment_uberon=UBERON:0001004!1.14e-11!72;UBERON:0000078!5.80e-09!18;UBERON:0000165!6.87e-08!28;UBERON:0000930!6.87e-08!28;UBERON:0000072!2.57e-07!46;UBERON:0001557!3.43e-07!19;UBERON:0001737!4.74e-07!9;UBERON:0000065!5.01e-07!53;UBERON:0001044!6.17e-07!6;UBERON:0003293!6.17e-07!6;UBERON:0003294!6.17e-07!6;UBERON:0010047!6.17e-07!6;UBERON:0000167!6.17e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.13e-15;28!UBERON:0001044;2.09e-11;6!UBERON:0003293;2.09e-11;6!UBERON:0003294;2.09e-11;6!UBERON:0010047;2.09e-11;6!UBERON:0003408;2.09e-11;6!UBERON:0000167;2.09e-11;6!UBERON:0001434;4.27e-11;36!UBERON:0000161;8.09e-10;19!UBERON:0000166;8.09e-10;19!UBERON:0000075;5.80e-09;16!UBERON:0007846;1.17e-08;3!UBERON:0000043;1.17e-08;3!UBERON:0007845;1.17e-08;3!UBERON:0004905;8.37e-08;8!UBERON:0000982;8.37e-08;8!UBERON:0004770;8.37e-08;8!UBERON:0002204;2.11e-07;70!UBERON:0004089;7.78e-07;2!UBERON:0001758;8.13e-07;6!UBERON:0003672;8.13e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000165;5.13e-15;28!UBERON:0001044;2.09e-11;6!UBERON:0003293;2.09e-11;6!UBERON:0003294;2.09e-11;6!UBERON:0010047;2.09e-11;6!UBERON:0003408;2.09e-11;6!UBERON:0000167;2.09e-11;6!UBERON:0001434;4.27e-11;36!UBERON:0000161;8.09e-10;19!UBERON:0000166;8.09e-10;19!UBERON:0000075;5.80e-09;16!UBERON:0007846;1.17e-08;3!UBERON:0000043;1.17e-08;3!UBERON:0007845;1.17e-08;3!UBERON:0004905;8.37e-08;8!UBERON:0000982;8.37e-08;8!UBERON:0004770;8.37e-08;8!UBERON:0002204;2.11e-07;70!UBERON:0004089;7.78e-07;2!UBERON:0001758;8.13e-07;6!UBERON:0003672;8.13e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,9.26e-17,29;UBERON:0000930,9.26e-17,29;UBERON:0000166,1.80e-12,22;UBERON:0001044,2.79e-11,6;UBERON:0003293,2.79e-11,6;UBERON:0003294,2.79e-11,6;UBERON:0010047,2.79e-11,6;UBERON:0000167,2.79e-11,6;UBERON:0001444,1.47e-09,49;UBERON:0000033,5.79e-09,56;UBERON:0000075,5.90e-09,16;UBERON:0007846,1.09e-08,3;UBERON:0000043,1.09e-08,3;UBERON:0007845,1.09e-08,3;UBERON:0011137,5.95e-08,14;UBERON:0004905,6.53e-08,8;UBERON:0000982,6.53e-08,8;UBERON:0004770,6.53e-08,8;UBERON:0000161,6.62e-08,36;UBERON:0000153,1.05e-07,62;UBERON:0007811,1.05e-07,62;UBERON:0001758,8.04e-07,6;UBERON:0003672,8.04e-07,6;UBERON:0004089,8.26e-07,2 | |||
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| ||
|short_description=p@chr2:45233049..45233071,- | |short_description=p@chr2:45233049..45233071,- | ||
}} | }} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45233049..45233071, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45233049..45233071, - |
Coexpression cluster: | C1906_Multipotent_small_normal_Fibroblast_smallcell_breast_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 6.81e-09 | 3 |
fibrocyte | 1.09e-08 | 3 |
tendon cell | 1.09e-08 | 3 |
fibroblast of gingiva | 1.28e-08 | 5 |
GAG secreting cell | 3.80e-07 | 9 |
carbohydrate secreting cell | 3.80e-07 | 9 |
fibroblast of periodontium | 8.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mouth | 9.26e-17 | 29 |
stomodeum | 9.26e-17 | 29 |
oral opening | 1.80e-12 | 22 |
saliva-secreting gland | 2.79e-11 | 6 |
gland of oral region | 2.79e-11 | 6 |
gland of foregut | 2.79e-11 | 6 |
oral gland | 2.79e-11 | 6 |
oral cavity | 2.79e-11 | 6 |
subdivision of head | 1.47e-09 | 49 |
head | 5.79e-09 | 56 |
subdivision of skeletal system | 5.90e-09 | 16 |
dense regular connective tissue | 1.09e-08 | 3 |
tendon | 1.09e-08 | 3 |
regular connective tissue | 1.09e-08 | 3 |
axial skeletal system | 5.95e-08 | 14 |
articulation | 6.53e-08 | 8 |
skeletal joint | 6.53e-08 | 8 |
articular system | 6.53e-08 | 8 |
orifice | 6.62e-08 | 36 |
anterior region of body | 1.05e-07 | 62 |
craniocervical region | 1.05e-07 | 62 |
periodontium | 8.04e-07 | 6 |
dentition | 8.04e-07 | 6 |
midface | 8.26e-07 | 2 |