FFCP PHASE1:Hg19::chr2:56144928..56144943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56144928..56144943,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56144928..56144943,- | |description=CAGE_peak_at_chr2:56144928..56144943,- | ||
|id=chr2:56144928..56144943,- | |id=chr2:56144928..56144943,- | ||
|ontology_enrichment_celltype=CL:0002139!9.87e-22!24;CL:0000213!4.28e-20!57;CL:0000215!4.28e-20!57;CL:0000222!3.33e-17!119;CL:0000071!8.16e-16!18;CL:0002546!8.16e-16!18;CL:0002078!3.03e-14!44;CL:0000115!7.44e-14!35;CL:0000076!8.26e-10!62;CL:1000413!9.65e-09!9;CL:0000220!1.86e-08!246;CL:0002321!3.16e-08!248;CL:0005020!1.59e-07!6;CL:0002138!1.59e-07!6;CL:0005022!1.59e-07!6 | |ontology_enrichment_celltype=CL:0002139!9.87e-22!24;CL:0000213!4.28e-20!57;CL:0000215!4.28e-20!57;CL:0000222!3.33e-17!119;CL:0000071!8.16e-16!18;CL:0002546!8.16e-16!18;CL:0002078!3.03e-14!44;CL:0000115!7.44e-14!35;CL:0000076!8.26e-10!62;CL:1000413!9.65e-09!9;CL:0000220!1.86e-08!246;CL:0002321!3.16e-08!248;CL:0005020!1.59e-07!6;CL:0002138!1.59e-07!6;CL:0005022!1.59e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.77e-23;24!CL:0000135;6.30e-19;3!CL:0000388;6.30e-19;3!CL:0000153;9.41e-17;9!CL:0000447;9.41e-17;9!CL:0002138;2.39e-16;6!CL:0000115;4.40e-16;36!CL:0002078;7.72e-14;45!CL:0000499;1.03e-12;28!CL:0000213;1.04e-12;58!CL:0000215;1.04e-12;58!CL:0000071;3.17e-11;18!CL:1000413;1.09e-10;9!CL:0000327;5.83e-10;15!CL:0000138;1.54e-09;6!CL:0000214;2.72e-09;3!CL:0002544;2.75e-09;6!CL:0002618;1.05e-08;3!CL:0002616;1.63e-07;1!CL:0000511;3.84e-07;1!CL:0002625;3.84e-07;1!CL:0000216;3.84e-07;1!CL:0002591;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.80e-23,58;CL:0000215,3.80e-23,58;CL:0002139,4.02e-23,24;CL:0002078,5.71e-20,45;CL:0000135,1.16e-18,3;CL:0000388,1.16e-18,3;CL:0000115,4.82e-18,36;CL:0000222,2.84e-17,121;CL:0000153,1.04e-16,9;CL:0000447,1.04e-16,9;CL:0005020,1.97e-16,6;CL:0002138,1.97e-16,6;CL:0005022,1.97e-16,6;CL:0000499,1.27e-12,28;CL:0000071,2.31e-11,18;CL:0002546,2.31e-11,18;CL:1000413,8.04e-11,9;CL:0000327,6.19e-10,15;CL:0000058,1.68e-09,6;CL:0000138,1.68e-09,6;CL:0002544,1.89e-09,6;CL:0000214,2.73e-09,3;CL:0002618,8.69e-09,3;CL:0002321,1.06e-07,250;CL:0002616,1.44e-07,1;CL:0000511,2.37e-07,1;CL:0002625,2.37e-07,1;CL:0000216,2.37e-07,1;CL:0002591,5.84e-07,1 | |||
|ontology_enrichment_development_v019=CL:0005022;2.39e-16;6!CL:0002546;3.17e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;3.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0006914!7.69e-17!25;UBERON:0004872!4.16e-16!84;UBERON:0001986!8.16e-16!18;UBERON:0004638!8.16e-16!18;UBERON:0004852!8.16e-16!18;UBERON:0000055!1.06e-15!69;UBERON:0000487!1.43e-15!22;UBERON:0002049!6.64e-15!79;UBERON:0007798!6.64e-15!79;UBERON:0001009!1.61e-14!113;UBERON:0004535!9.81e-14!110;UBERON:0001981!1.20e-12!60;UBERON:0007500!1.20e-12!60;UBERON:0004537!1.20e-12!60;UBERON:0006965!1.20e-12!60;UBERON:0000477!2.21e-10!286;UBERON:0003914!5.56e-10!118;UBERON:0004111!2.24e-09!241;UBERON:0001637!4.50e-09!42;UBERON:0003509!4.50e-09!42;UBERON:0004572!4.50e-09!42;UBERON:0000490!5.89e-09!138;UBERON:0003915!9.65e-09!9;UBERON:0004700!9.65e-09!9;UBERON:0001917!9.65e-09!9;UBERON:0004573!3.55e-07!33;UBERON:0004571!3.55e-07!33;UBERON:0000947!5.05e-07!21;UBERON:0010191!5.05e-07!21 | |ontology_enrichment_uberon=UBERON:0006914!7.69e-17!25;UBERON:0004872!4.16e-16!84;UBERON:0001986!8.16e-16!18;UBERON:0004638!8.16e-16!18;UBERON:0004852!8.16e-16!18;UBERON:0000055!1.06e-15!69;UBERON:0000487!1.43e-15!22;UBERON:0002049!6.64e-15!79;UBERON:0007798!6.64e-15!79;UBERON:0001009!1.61e-14!113;UBERON:0004535!9.81e-14!110;UBERON:0001981!1.20e-12!60;UBERON:0007500!1.20e-12!60;UBERON:0004537!1.20e-12!60;UBERON:0006965!1.20e-12!60;UBERON:0000477!2.21e-10!286;UBERON:0003914!5.56e-10!118;UBERON:0004111!2.24e-09!241;UBERON:0001637!4.50e-09!42;UBERON:0003509!4.50e-09!42;UBERON:0004572!4.50e-09!42;UBERON:0000490!5.89e-09!138;UBERON:0003915!9.65e-09!9;UBERON:0004700!9.65e-09!9;UBERON:0001917!9.65e-09!9;UBERON:0004573!3.55e-07!33;UBERON:0004571!3.55e-07!33;UBERON:0000947!5.05e-07!21;UBERON:0010191!5.05e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.30e-19;3!UBERON:0000043;6.30e-19;3!UBERON:0007845;6.30e-19;3!UBERON:0006914;9.66e-18;25!UBERON:0001473;2.67e-12;8!UBERON:0004536;2.67e-12;8!UBERON:0006558;2.67e-12;8!UBERON:0000487;3.34e-12;22!UBERON:0004638;3.17e-11;18!UBERON:0001986;3.17e-11;18!UBERON:0004852;3.17e-11;18!UBERON:0003915;1.09e-10;9!UBERON:0004700;1.09e-10;9!UBERON:0001917;1.09e-10;9!UBERON:0002465;7.32e-10;10!UBERON:0000055;1.51e-09;65!UBERON:0006915;2.72e-09;3!UBERON:0007616;2.72e-09;3!UBERON:0002217;2.72e-09;3!UBERON:0002018;2.72e-09;3!UBERON:0000490;4.73e-08;33!UBERON:0002049;3.13e-07;75!UBERON:0007798;3.13e-07;75!UBERON:0001136;3.84e-07;1!UBERON:0001343;3.84e-07;1!UBERON:0007195;3.84e-07;1!UBERON:0004910;3.84e-07;1!UBERON:0004813;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.16e-18,3;UBERON:0000043,1.16e-18,3;UBERON:0007845,1.16e-18,3;UBERON:0006914,5.81e-18,25;UBERON:0000487,2.15e-12,22;UBERON:0001473,2.32e-12,8;UBERON:0004536,2.32e-12,8;UBERON:0006558,2.32e-12,8;UBERON:0000055,4.09e-12,68;UBERON:0002049,5.68e-12,78;UBERON:0007798,5.68e-12,78;UBERON:0004638,2.31e-11,18;UBERON:0001986,2.31e-11,18;UBERON:0004852,2.31e-11,18;UBERON:0003915,8.04e-11,9;UBERON:0004700,8.04e-11,9;UBERON:0001917,8.04e-11,9;UBERON:0002465,6.54e-10,10;UBERON:0006915,2.73e-09,3;UBERON:0007616,2.73e-09,3;UBERON:0002217,2.73e-09,3;UBERON:0002018,2.73e-09,3;UBERON:0004535,4.34e-09,109;UBERON:0001009,9.14e-09,112;UBERON:0001136,2.37e-07,1;UBERON:0001343,2.37e-07,1;UBERON:0004910,2.37e-07,1;UBERON:0005154,2.37e-07,1;UBERON:0005295,2.37e-07,1;UBERON:0004813,2.37e-07,1;UBERON:0005297,2.37e-07,1;UBERON:0005294,2.37e-07,1;UBERON:0010141,2.37e-07,1;UBERON:0005891,2.37e-07,1;UBERON:0007195,6.97e-07,1 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0,2.61701557230111,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0.361439152384566,1.00267582127178,4.49024208778554,0,1.45990461090791,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0,1.13061588384802,0.838998872419812,0.550236083880135,2.29894463190492,0.258416759169329,1.42306505074684,0.33472061276467,0.805658634218294,0.760272105718513,0.976248230192678,0.735326160691737,1.62028389576352,1.25019619597712,1.34717623575702,0.788280363383256,0,0.949265659568129,0.916008719652036,0,0,0,1.98788780678127,0.886413581652058,0,0.860509862246441,0.354668382198357,0.560677600142307,0,0.24666754841716,0.933633106199299,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.567160915800105,0.358779271377724,1.2813443329114,0.423863802319124,0,0,0,0,0.168776332241266,0,0,0.552299391853796,0.323292113637624,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,1.15493158208859,4.62985512576611,3.42457474022277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.24782516918484,0.356857977594324,0.315404830067869,0.35142424497814,0.902838299183157,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0.61384789315225,1.12264037773229,0.384417447767103,0,0.64341568457443,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,2.15915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.515205058238611,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0.870100163485371,0,0.0890320356467374,0.330569830721956,0.384380134730212,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,1.14378116354295,0,0,0,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0.136499911407986,0.282810863907425,1.13008116620243,0,1.32687795048244,1.31535265576129,0,0,0,0,0,0,0,0,0,4.43326034125095,2.30506425071931,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.333926115068718,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0.508507300585533,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.41827123283581,0,0.341826167541004,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.581934098930517,0,0,0.548167698587004,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0,0.228840068396924,0.604923695052956,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0.260994291965212,0,0.463044948647668,1.22368352253234,0.537266523244462,4.32322026025361,0.877136198314828,0.353378291891762,0.192914038270915,0.844712203265363,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.192687675289379,0,0,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,1.14986184875636,0,0,0,0,0.266107110487916,0,0.514464028312255,0,0,0,0,0.39246546425257,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,1.11598505450025,4.15958065768276,2.59575937274273,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0.435433495793923,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 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591026,0 | ||
|short_description=p@chr2:56144928..56144943,- | |short_description=p@chr2:56144928..56144943,- | ||
}} | }} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56144928..56144943, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56144928..56144943, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.80e-23 | 58 |
barrier cell | 3.80e-23 | 58 |
endothelial cell of vascular tree | 4.02e-23 | 24 |
meso-epithelial cell | 5.71e-20 | 45 |
fibrocyte | 1.16e-18 | 3 |
tendon cell | 1.16e-18 | 3 |
endothelial cell | 4.82e-18 | 36 |
mesodermal cell | 2.84e-17 | 121 |
GAG secreting cell | 1.04e-16 | 9 |
carbohydrate secreting cell | 1.04e-16 | 9 |
lymphangioblast | 1.97e-16 | 6 |
endothelial cell of lymphatic vessel | 1.97e-16 | 6 |
vascular lymphangioblast | 1.97e-16 | 6 |
stromal cell | 1.27e-12 | 28 |
blood vessel endothelial cell | 2.31e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.31e-11 | 18 |
endothelial cell of artery | 8.04e-11 | 9 |
extracellular matrix secreting cell | 6.19e-10 | 15 |
chondroblast | 1.68e-09 | 6 |
chondrocyte | 1.68e-09 | 6 |
aortic endothelial cell | 1.89e-09 | 6 |
synovial cell | 2.73e-09 | 3 |
endothelial cell of umbilical vein | 8.69e-09 | 3 |
embryonic cell | 1.06e-07 | 250 |
perirenal adipocyte cell | 1.44e-07 | 1 |
androgen binding protein secreting cell | 2.37e-07 | 1 |
seminiferous tubule epithelial cell | 2.37e-07 | 1 |
Sertoli cell | 2.37e-07 | 1 |
smooth muscle cell of the pulmonary artery | 5.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.97e-07 | 1 |