FFCP PHASE1:Hg19::chr3:100566479..100566490,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:100566479..100566490,- to FFCP PHASE1:Hg19::chr3:100566479..100566490,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:100566479..100566490,- | |||
|description=CAGE_peak_at_chr3:100566479..100566490,- | |||
|id=chr3:100566479..100566490,- | |||
|ontology_enrichment_celltype=CL:0000153!8.90e-07!9;CL:0000447!8.90e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000214;2.19e-14;3!CL:0000151;6.88e-12;36!CL:0000511;1.01e-11;1!CL:0002625;1.01e-11;1!CL:0000216;1.01e-11;1!CL:0000153;1.38e-10;9!CL:0000447;1.38e-10;9!CL:0000154;7.82e-08;6!CL:0000197;1.23e-07;6!CL:0000098;1.23e-07;6!CL:0002167;1.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.62e-14,3;CL:0000151,5.26e-13,36;CL:0000511,1.06e-11,1;CL:0002625,1.06e-11,1;CL:0000216,1.06e-11,1;CL:0000153,9.96e-11,9;CL:0000447,9.96e-11,9;CL:0000154,7.83e-08,6;CL:0000197,1.17e-07,6;CL:0000098,1.17e-07,6;CL:0002167,1.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.61e-12;1!UBERON:0003099;3.11e-11;1!UBERON:0003852;3.11e-11;1!UBERON:0005062;7.71e-11;4!UBERON:0007284;7.71e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;3.11e-11;1!DOID:4235;3.11e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.60e-11,1;DOID:4235,3.28e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000078!9.77e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.19e-14;3!UBERON:0007616;2.19e-14;3!UBERON:0002217;2.19e-14;3!UBERON:0002018;2.19e-14;3!UBERON:0001136;1.01e-11;1!UBERON:0001343;1.01e-11;1!UBERON:0004910;1.01e-11;1!UBERON:0004813;1.01e-11;1!UBERON:0002171;1.30e-11;1!UBERON:0006518;1.30e-11;1!UBERON:0008949;1.30e-11;1!UBERON:0000101;1.30e-11;1!UBERON:0002167;1.30e-11;1!UBERON:0002146;3.11e-11;1!UBERON:0005705;3.11e-11;1!UBERON:0008193;3.11e-11;1!UBERON:0010912;3.11e-11;1!UBERON:0005623;3.11e-11;1!UBERON:0002514;3.11e-11;1!UBERON:0003457;3.11e-11;1!UBERON:0008907;3.11e-11;1!UBERON:0008001;3.11e-11;1!UBERON:0007213;3.11e-11;1!UBERON:0009891;3.11e-11;1!UBERON:0007914;3.11e-11;1!UBERON:0007375;3.11e-11;1!UBERON:0003323;3.11e-11;1!UBERON:0010258;3.11e-11;1!UBERON:0005253;3.11e-11;1!UBERON:0007842;3.11e-11;1!UBERON:0002397;3.11e-11;1!UBERON:0003113;3.11e-11;1!UBERON:0003277;3.11e-11;1!UBERON:0001709;3.11e-11;1!UBERON:0002244;3.11e-11;1!UBERON:0005620;3.11e-11;1!UBERON:0010364;3.11e-11;1!UBERON:0004288;3.11e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.62e-14,3;UBERON:0007616,1.62e-14,3;UBERON:0002217,1.62e-14,3;UBERON:0002018,1.62e-14,3;UBERON:0001136,1.06e-11,1;UBERON:0001343,1.06e-11,1;UBERON:0004910,1.06e-11,1;UBERON:0005154,1.06e-11,1;UBERON:0005295,1.06e-11,1;UBERON:0004813,1.06e-11,1;UBERON:0005297,1.06e-11,1;UBERON:0005294,1.06e-11,1;UBERON:0010141,1.06e-11,1;UBERON:0005891,1.06e-11,1;UBERON:0002171,1.18e-11,1;UBERON:0006518,1.18e-11,1;UBERON:0008949,1.18e-11,1;UBERON:0000101,1.18e-11,1;UBERON:0002167,1.18e-11,1;UBERON:0002146,4.01e-11,1;UBERON:0005623,4.01e-11,1;UBERON:0005705,4.91e-11,1;UBERON:0008193,4.91e-11,1;UBERON:0010912,4.91e-11,1;UBERON:0002514,4.91e-11,1;UBERON:0003457,4.91e-11,1;UBERON:0008907,4.91e-11,1;UBERON:0008001,4.91e-11,1;UBERON:0007213,4.91e-11,1;UBERON:0009891,4.91e-11,1;UBERON:0007914,4.91e-11,1;UBERON:0009292,4.91e-11,1;UBERON:0003099,4.91e-11,1;UBERON:0007375,4.91e-11,1;UBERON:0003323,4.91e-11,1;UBERON:0010258,4.91e-11,1;UBERON:0007842,4.91e-11,1;UBERON:0009494,4.91e-11,1;UBERON:0010042,4.91e-11,1;UBERON:0010045,4.91e-11,1;UBERON:0010259,4.91e-11,1;UBERON:0010359,4.91e-11,1;UBERON:0009526,4.91e-11,1;UBERON:0002397,4.91e-11,1;UBERON:0003113,4.91e-11,1;UBERON:0003277,4.91e-11,1;UBERON:0001709,4.91e-11,1;UBERON:0004066,4.91e-11,1;UBERON:0002244,4.91e-11,1;UBERON:0005620,4.91e-11,1;UBERON:0004362,4.91e-11,1;UBERON:0010364,4.91e-11,1;UBERON:0010046,4.91e-11,1;UBERON:0005868,4.91e-11,1;UBERON:0007238,4.91e-11,1;UBERON:0004288,4.91e-11,1;UBERON:0004068,4.91e-11,1;UBERON:0010334,4.91e-11,1;UBERON:0003852,4.91e-11,1;UBERON:0010253,4.91e-11,1 | |||
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|short_description=p@chr3:100566479..100566490,- | |||
}} | }} |
Latest revision as of 13:40, 29 July 2015
Short description: | p@chr3:100566479..100566490, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100566479..100566490, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.62e-14 | 3 |
secretory cell | 5.26e-13 | 36 |
androgen binding protein secreting cell | 1.06e-11 | 1 |
seminiferous tubule epithelial cell | 1.06e-11 | 1 |
Sertoli cell | 1.06e-11 | 1 |
GAG secreting cell | 9.96e-11 | 9 |
carbohydrate secreting cell | 9.96e-11 | 9 |
protein secreting cell | 7.83e-08 | 6 |
receptor cell | 1.17e-07 | 6 |
sensory epithelial cell | 1.17e-07 | 6 |
olfactory epithelial cell | 1.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.60e-11 | 1 |
spindle cell sarcoma | 3.28e-11 | 1 |