FFCP PHASE1:Hg19::chr3:112320522..112320525,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112320522..112320525,- | |||
|description=CAGE_peak_at_chr3:112320522..112320525,- | |description=CAGE_peak_at_chr3:112320522..112320525,- | ||
|id=chr3:112320522..112320525,- | |id=chr3:112320522..112320525,- | ||
|ontology_enrichment_celltype=CL:1000306!8.80e-08!4;CL:0002547!8.80e-08!4;CL:0000055!2.61e-07!180;CL:0000680!7.22e-07!57;CL:0000056!7.22e-07!57;CL:0000355!7.22e-07!57 | |ontology_enrichment_celltype=CL:1000306!8.80e-08!4;CL:0002547!8.80e-08!4;CL:0000055!2.61e-07!180;CL:0000680!7.22e-07!57;CL:0000056!7.22e-07!57;CL:0000355!7.22e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002588;4.66e-20;2!CL:0000135;8.71e-14;3!CL:0000388;8.71e-14;3!CL:0002580;1.81e-13;3!CL:0002334;1.12e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,3.67e-20,2;CL:0000135,6.96e-14,3;CL:0000388,6.96e-14,3;CL:0002580,2.19e-13,3;CL:0002334,1.24e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.59e-08!57;UBERON:0000415!8.80e-08!4;UBERON:0007240!8.80e-08!4;UBERON:0005742!8.80e-08!4;UBERON:0005734!8.80e-08!4;UBERON:0004664!8.80e-08!4;UBERON:0004663!8.80e-08!4;UBERON:0004872!2.78e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.71e-14;3!UBERON:0000043;8.71e-14;3!UBERON:0007845;8.71e-14;3!UBERON:0000310;4.08e-09;10!UBERON:0002066;1.40e-08;5!UBERON:0001443;2.48e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.96e-14,3;UBERON:0000043,6.96e-14,3;UBERON:0007845,6.96e-14,3;UBERON:0000310,4.50e-09,10;UBERON:0002066,1.27e-08,5;UBERON:0001443,2.71e-08,11 | |||
|phase1_expression=2.54349730978779,0.642301571672949,0.845726424575827,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,3.50936537445123,0.724232594804119,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.573673241497627,7.4480360261655,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0,0.213557388818567,1.48352330811693,0,0,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0.500170521059677,0,0.415941723061614,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.907170879989041,1.48864684691266,0,1.12264037773229,0.128139149255701,0,2.0911009748669,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,1.25924938732256,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,1.28381696410176,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,1.57752487424457,2.65272410735427,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.921482106297696,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0.160317640503067,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.532321948353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0.470317296361523,0.245148321753905,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23522940041993,1.73050624849516,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=2.54349730978779,0.642301571672949,0.845726424575827,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,3.50936537445123,0.724232594804119,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.573673241497627,7.4480360261655,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0,0.213557388818567,1.48352330811693,0,0,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0.500170521059677,0,0.415941723061614,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.907170879989041,1.48864684691266,0,1.12264037773229,0.128139149255701,0,2.0911009748669,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,1.25924938732256,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,1.28381696410176,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,1.57752487424457,2.65272410735427,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.921482106297696,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0.160317640503067,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.532321948353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0.470317296361523,0.245148321753905,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23522940041993,1.73050624849516,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:112320522..112320525,- | |short_description=p@chr3:112320522..112320525,- | ||
}} | }} |
Latest revision as of 14:17, 29 July 2015
Short description: | p@chr3:112320522..112320525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112320522..112320525, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 3.67e-20 | 2 |
fibrocyte | 6.96e-14 | 3 |
tendon cell | 6.96e-14 | 3 |
preadipocyte of the breast | 2.19e-13 | 3 |
preadipocyte | 1.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.96e-14 | 3 |
tendon | 6.96e-14 | 3 |
regular connective tissue | 6.96e-14 | 3 |
breast | 4.50e-09 | 10 |
umbilical vein | 1.27e-08 | 5 |
chest | 2.71e-08 | 11 |