FFCP PHASE1:Hg19::chr3:142682785..142682816,-: Difference between revisions
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|id=chr3:142682785..142682816,-
|short_description=p@chr3:142682785..142682816,-
|description=CAGE_peak_at_chr3:142682785..142682816,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:142682785..142682816,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr3:142682785..142682816,- | |||
|id=chr3:142682785..142682816,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.34e-40;2!CL:0000558;1.34e-40;2!CL:0002591;6.31e-21;1!CL:0002567;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.34e-40,2;CL:0000765,1.34e-40,2;CL:0000050,1.34e-40,2;CL:0000038,1.34e-40,2;CL:0000558,1.34e-40,2;CL:0000547,1.34e-40,2;CL:0000549,1.34e-40,2;CL:0000550,1.34e-40,2;CL:0000552,1.34e-40,2;CL:0002591,7.72e-21,1;CL:0002567,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.70e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-18!115;UBERON:0003075!5.25e-14!86;UBERON:0007284!5.25e-14!86;UBERON:0002346!4.85e-13!90;UBERON:0005743!2.94e-11!86;UBERON:0000073!1.46e-10!94;UBERON:0001016!1.46e-10!94;UBERON:0001049!2.49e-10!57;UBERON:0005068!2.49e-10!57;UBERON:0006241!2.49e-10!57;UBERON:0007135!2.49e-10!57;UBERON:0001017!6.87e-09!82;UBERON:0002298!1.13e-08!8;UBERON:0000955!2.03e-08!69;UBERON:0006238!2.03e-08!69;UBERON:0003076!1.02e-07!15;UBERON:0003057!1.02e-07!15;UBERON:0002616!1.34e-07!59;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0000033!2.44e-07!123;UBERON:0004121!2.87e-07!169;UBERON:0000924!6.49e-07!173;UBERON:0006601!6.49e-07!173;UBERON:0001896!8.87e-07!3;UBERON:0005290!8.87e-07!3;UBERON:0010096!8.87e-07!3;UBERON:0007100!9.12e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;6.31e-21;1!UBERON:0000078;3.70e-11;2!UBERON:0002133;3.70e-11;2!UBERON:0002012;3.70e-11;2!UBERON:0008886;3.70e-11;2!UBERON:0000473;4.43e-11;8!UBERON:0010313;7.96e-09;10!UBERON:0003135;2.62e-08;11!UBERON:0003978;7.26e-08;3!UBERON:0000946;7.26e-08;3!UBERON:0007100;1.04e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,9.43e-21,1;UBERON:0007100,5.46e-12,27;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0002133,4.52e-11,2;UBERON:0010313,8.96e-09,10;UBERON:0002342,8.96e-09,10;UBERON:0005062,8.96e-09,10;UBERON:0003135,2.62e-08,11;UBERON:0007023,2.70e-08,114;UBERON:0004145,7.76e-08,3;UBERON:0003978,8.29e-08,3;UBERON:0009751,8.29e-08,3;UBERON:0000946,8.29e-08,3;UBERON:0002523,8.29e-08,3;UBERON:0005983,8.29e-08,3;UBERON:0002165,8.29e-08,3;UBERON:0002062,8.29e-08,3;UBERON:0007280,8.29e-08,3 | |||
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| ||
|short_description=p@chr3:142682785..142682816,- | |||
}} | }} |
Latest revision as of 16:33, 29 July 2015
Short description: | p@chr3:142682785..142682816, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:142682785..142682816, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.34e-40 | 2 |
erythroblast | 1.34e-40 | 2 |
megakaryocyte-erythroid progenitor cell | 1.34e-40 | 2 |
erythroid progenitor cell | 1.34e-40 | 2 |
reticulocyte | 1.34e-40 | 2 |
proerythroblast | 1.34e-40 | 2 |
basophilic erythroblast | 1.34e-40 | 2 |
polychromatophilic erythroblast | 1.34e-40 | 2 |
orthochromatic erythroblast | 1.34e-40 | 2 |
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
light melanocyte | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 9.43e-21 | 1 |
primary circulatory organ | 5.46e-12 | 27 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
testis | 4.43e-11 | 8 |
atrioventricular valve | 4.52e-11 | 2 |
neural crest-derived structure | 8.96e-09 | 10 |
neural crest | 8.96e-09 | 10 |
neural fold | 8.96e-09 | 10 |
male reproductive organ | 2.62e-08 | 11 |
adult organism | 2.70e-08 | 114 |
outflow tract | 7.76e-08 | 3 |
valve | 8.29e-08 | 3 |
cardiac mesenchyme | 8.29e-08 | 3 |
cardial valve | 8.29e-08 | 3 |
tunica intima | 8.29e-08 | 3 |
heart layer | 8.29e-08 | 3 |
endocardium | 8.29e-08 | 3 |
endocardial cushion | 8.29e-08 | 3 |
presumptive endocardium | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.70e-11 | 2 |