FFCP PHASE1:Hg19::chr3:170140945..170141037,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:170140945..170141037,+
|short_description=p@chr3:170140945..170141037,+
|description=CAGE_peak_at_chr3:170140945..170141037,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:170140945..170141037,+ | |||
|coexpression_cluster_id=C635 | |||
|description=CAGE_peak_at_chr3:170140945..170141037,+ | |||
|id=chr3:170140945..170141037,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.23e-24!119;CL:0000055!5.08e-21!180;CL:0000183!6.16e-19!59;CL:0000680!1.04e-16!57;CL:0000056!1.04e-16!57;CL:0000355!1.04e-16!57;CL:0000187!3.05e-16!54;CL:0000057!6.53e-15!75;CL:0000393!5.05e-14!60;CL:0000211!5.05e-14!60;CL:0000192!4.92e-13!42;CL:0000514!4.92e-13!42;CL:0000213!1.02e-08!57;CL:0000215!1.02e-08!57;CL:0002139!1.85e-08!24;CL:0000220!2.74e-08!246;CL:0002321!5.60e-08!248;CL:0002078!8.69e-08!44;CL:0000359!1.29e-07!32;CL:0000115!1.37e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.66e-09;24!CL:0000115;1.14e-08;36!CL:0000187;2.22e-08;55!CL:0002078;5.60e-07;45!CL:0000213;6.54e-07;58!CL:0000215;6.54e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.58e-24,121;CL:0000187,1.58e-14,55;CL:0000680,3.59e-14,58;CL:0000056,3.59e-14,58;CL:0000355,3.59e-14,58;CL:0000393,4.91e-12,61;CL:0000211,4.91e-12,61;CL:0000213,1.27e-10,58;CL:0000215,1.27e-10,58;CL:0000192,1.55e-10,43;CL:0000514,1.55e-10,43;CL:0000115,1.62e-10,36;CL:0002321,9.92e-10,250;CL:0002078,1.24e-09,45;CL:0000057,1.98e-09,76;CL:0002139,2.13e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000222;4.51e-08;121!CL:0000355;6.17e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!6.41e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.64e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.15e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000119!2.60e-21!312;UBERON:0000483!2.85e-20!309;UBERON:0000914!1.17e-18!83;UBERON:0002329!1.17e-18!83;UBERON:0003077!1.17e-18!83;UBERON:0003059!1.17e-18!83;UBERON:0007282!1.17e-18!83;UBERON:0009618!1.17e-18!83;UBERON:0007285!1.17e-18!83;UBERON:0002049!3.17e-18!79;UBERON:0007798!3.17e-18!79;UBERON:0004290!8.19e-18!70;UBERON:0000477!1.26e-16!286;UBERON:0000486!1.37e-15!82;UBERON:0004111!5.00e-15!241;UBERON:0005256!6.07e-15!143;UBERON:0002385!1.87e-14!63;UBERON:0001015!1.87e-14!63;UBERON:0000383!1.87e-14!63;UBERON:0001134!2.17e-14!61;UBERON:0002036!2.17e-14!61;UBERON:0003082!2.17e-14!61;UBERON:0000055!1.48e-13!69;UBERON:0004535!2.41e-13!110;UBERON:0000025!3.49e-13!194;UBERON:0000475!5.79e-13!365;UBERON:0001009!9.29e-13!113;UBERON:0003914!8.57e-11!118;UBERON:0001981!2.52e-10!60;UBERON:0007500!2.52e-10!60;UBERON:0004537!2.52e-10!60;UBERON:0006965!2.52e-10!60;UBERON:0004872!4.92e-10!84;UBERON:0000490!5.58e-10!138;UBERON:0000481!2.83e-09!347;UBERON:0001637!3.89e-09!42;UBERON:0003509!3.89e-09!42;UBERON:0004572!3.89e-09!42;UBERON:0002100!3.15e-08!216;UBERON:0003075!6.18e-08!86;UBERON:0007284!6.18e-08!86;UBERON:0002616!8.89e-08!59;UBERON:0000947!1.00e-07!21;UBERON:0010191!1.00e-07!21;UBERON:0004573!1.43e-07!33;UBERON:0004571!1.43e-07!33;UBERON:0001049!3.70e-07!57;UBERON:0005068!3.70e-07!57;UBERON:0006241!3.70e-07!57;UBERON:0007135!3.70e-07!57;UBERON:0000467!3.73e-07!625;UBERON:0000468!3.76e-07!659;UBERON:0000480!4.86e-07!626;UBERON:0002346!6.49e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.51e-08;8!UBERON:0004536;5.51e-08;8!UBERON:0006558;5.51e-08;8!UBERON:0000055;1.81e-07;65!UBERON:0011135;2.32e-07;5!UBERON:0002216;2.32e-07;5!UBERON:0011134;2.32e-07;5!UBERON:0002209;2.32e-07;5!UBERON:0002213;2.32e-07;5!UBERON:0007844;2.32e-07;5!UBERON:0011138;2.32e-07;5!UBERON:0001130;2.32e-07;5!UBERON:0001066;2.32e-07;5!UBERON:0001468;2.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.48e-19,78;UBERON:0002329,4.53e-17,71;UBERON:0003059,4.53e-17,71;UBERON:0007282,4.53e-17,71;UBERON:0004290,4.53e-17,71;UBERON:0009618,4.53e-17,71;UBERON:0003077,1.22e-16,72;UBERON:0007285,1.22e-16,72;UBERON:0007524,3.20e-16,73;UBERON:0000486,1.36e-14,83;UBERON:0002049,4.33e-14,78;UBERON:0007798,4.33e-14,78;UBERON:0000119,8.80e-13,309;UBERON:0005256,9.82e-13,122;UBERON:0001134,1.53e-12,62;UBERON:0002036,1.53e-12,62;UBERON:0003082,1.53e-12,62;UBERON:0000490,4.57e-12,148;UBERON:0002385,8.20e-12,64;UBERON:0001015,8.20e-12,64;UBERON:0000383,8.20e-12,64;UBERON:0000483,8.20e-12,306;UBERON:0003104,1.05e-11,160;UBERON:0009142,1.05e-11,160;UBERON:0000055,3.26e-11,68;UBERON:0004535,3.63e-10,109;UBERON:0001009,1.54e-09,112;UBERON:0001473,4.62e-08,8;UBERON:0004536,4.62e-08,8;UBERON:0006558,4.62e-08,8;UBERON:0004111,1.00e-07,240;UBERON:0011135,2.27e-07,5;UBERON:0002216,2.27e-07,5;UBERON:0011134,2.27e-07,5;UBERON:0002209,2.27e-07,5;UBERON:0002213,2.27e-07,5;UBERON:0005856,2.27e-07,5;UBERON:0005866,2.27e-07,5;UBERON:0005863,2.27e-07,5;UBERON:0007844,2.27e-07,5;UBERON:0011138,2.27e-07,5;UBERON:0001130,2.27e-07,5;UBERON:0001066,2.27e-07,5;UBERON:0001468,2.27e-07,5;UBERON:0003914,2.48e-07,117;UBERON:0007500,2.60e-07,59;UBERON:0001981,2.60e-07,59;UBERON:0004537,2.60e-07,59;UBERON:0006965,2.60e-07,59;UBERON:0000926,5.39e-07,315;UBERON:0004120,5.39e-07,315;UBERON:0006603,5.39e-07,315;UBERON:0002067,9.11e-07,9;UBERON:0004016,9.11e-07,9;UBERON:0010083,9.11e-07,9 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0.446961094427288,1.74467704820074,0,5.68547886084148,1.04474251279935,2.21160542851358,0,0,0,6.43585035392242,9.27912652038164,2.01697543935533,3.01347264011988,1.46062018077475,1.95173119516203,1.47745269692145,4.89601658986207,1.56727360739044,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04580098949649,0,0,0.289693037921647,0,0,0.378139268656271,0.886917589850256,1.31752178539689,0.589405839739707,0,0,0,0,0.132957960518865,0,0,0,0.596287222100115,2.58070378531837,0.694281003215189,2.82653970962005,0.838998872419812,0,1.04497483268405,5.42675194255591,6.75955899104749,1.33888245105868,1.61131726843659,2.28081631715554,1.22031028774085,8.08858776760911,0,2.67899184852239,1.57170560838319,1.23872628531654,0,1.89853131913626,2.74802615895611,0,0,0,0.993943903390637,3.29239330327907,0.926864265692532,5.16305917347865,4.25602058638028,1.68203280042692,1.06748995729705,0,1.55605517699883,0.538842688278752,0.817309515567294,8.77873080340602,8.64263886719998,0.937285727335186,1.87296046098192,1.1409436430889,7.62188270814185,3.05329696473789,2.10434827678571,2.38766371393822,0.408308342509787,2.08818339430006,0,1.18800285728205,0.741800787835671,2.73048408581408,13.6537446945085,0.673344455816265,1.7516592782075,0.554128230968366,0,0.612975591598039,1.05166641234618,0.567160915800105,0,0,1.27159140695737,0.900273288253207,1.23663035086127,0.772921620136887,0.558350568994769,0,0.487185025805993,0,0.828449087780694,2.26304479546337,0,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,4.69348596989448,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,6.173610169971,8.82052268313252,0,0,0,0,0,0.857839051492628,0,0,0,0,0.977424915930974,8.31947828223663,1.44331342025273,0,0.70445216541493,2.02113026865503,1.85194205030644,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,1.12131084345361,3.05172048183296,1.1734125731352,2.19761916788222,0,0.845302752556,1.59562869950922,0,0.257207374262142,0,1.0656887160644,1.71573592389777,0,1.64648067356154,0.977208552881205,1.06617584622764,0,1.50719688529793,1.74306691720059,3.499054691372,0,0,0,0,0,1.42636905040718,1.73737568001095,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,8.71109591205893,12.5042630264919,6.78162559249339,6.23912584592421,2.67643483195743,1.57702415033935,5.27136367467209,0.902838299183157,2.27407504055985,3.10419213877515,0,0,1.56390506042549,11.5522682903017,17.1571711905428,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0,0.280660094433074,1.02511319404561,1.02341449813341,0.482561763430822,0,7.86469438393543,7.10246901252508,10.5944031257814,12.4621063004069,15.6884010920945,0,0,0.0920809889358963,7.23331023437022,12.20010825645,25.1758876722094,0,0,2.35304930753057,1.46139224653261,0.105551628892876,12.5106722477986,11.0560908429735,1.29549549661284,6.16909010761157,0.812839312631559,1.00337954770971,0.254876273045038,0,1.34324852833307,0,0,0.512900250232778,2.62411716559765,0.325378394664303,0,0,0,1.14853107599234,0,0,6.86362099874066,3.54311819363682,1.5350367472613,1.24052915236078,2.0409846524972,2.17525040871343,2.30111894023472,0.623224249527161,0,0,0,0,0.929691098594572,3.1481234683064,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,0.37064843820784,0,2.232950216158,0.632758849437452,1.33441135746677,2.55897791311334,0.42793898803392,1.90921948755562,1.56989728039846,1.97859703341646,2.19629623788844,4.3590588867904,1.81964233415984,0,2.52755073743389,3.90106991271672,3.41198885483798,0,10.7834930012309,23.1904908404089,1.13008116620243,0,0,1.31535265576129,6.36653087693356,3.9353685122798,1.62328301570163,0.30982349809975,0.281695602532241,1.14729081763241,0.88424136911809,3.21003946333125,1.06428319221179,0.633322905892992,2.96365403663912,1.51789269506286,3.14941248220485,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,2.90799823828566,0.74214478529481,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,1.52581736317083,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0,0,2.08943512240099,0,1.40558667435203,0,0,0.485560759068186,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.253243183823515,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0,0,0,0,2.40168115483916,2.87501295673185,0,2.14882720709979,0,0.27928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| ||
|short_description=p@chr3:170140945..170141037,+ | |||
}} | }} |
Latest revision as of 18:09, 29 July 2015
Short description: | p@chr3:170140945..170141037, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170140945..170141037, + |
Coexpression cluster: | C635_Fibroblast_Pericytes_Nucleus_Preadipocyte_Smooth_mesothelioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.58e-24 | 121 |
muscle cell | 1.58e-14 | 55 |
muscle precursor cell | 3.59e-14 | 58 |
myoblast | 3.59e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.59e-14 | 58 |
electrically responsive cell | 4.91e-12 | 61 |
electrically active cell | 4.91e-12 | 61 |
lining cell | 1.27e-10 | 58 |
barrier cell | 1.27e-10 | 58 |
smooth muscle cell | 1.55e-10 | 43 |
smooth muscle myoblast | 1.55e-10 | 43 |
endothelial cell | 1.62e-10 | 36 |
embryonic cell | 9.92e-10 | 250 |
meso-epithelial cell | 1.24e-09 | 45 |
fibroblast | 1.98e-09 | 76 |
endothelial cell of vascular tree | 2.13e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.15e-08 | 14 |