FFCP PHASE1:Hg19::chr3:170150588..170150600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170150588..170150600,+ | |||
|coexpression_cluster_id=C635 | |||
|description=CAGE_peak_at_chr3:170150588..170150600,+ | |description=CAGE_peak_at_chr3:170150588..170150600,+ | ||
|id=chr3:170150588..170150600,+ | |id=chr3:170150588..170150600,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.99e-19!180;CL:0000057!4.67e-17!75;CL:0000222!7.20e-17!119;CL:0000183!2.31e-14!59;CL:0000187!7.11e-12!54;CL:0000680!2.09e-11!57;CL:0000056!2.09e-11!57;CL:0000355!2.09e-11!57;CL:0000393!1.58e-10!60;CL:0000211!1.58e-10!60;CL:0000192!2.29e-09!42;CL:0000514!2.29e-09!42;CL:0000630!2.18e-07!9;CL:0002620!4.14e-07!23;CL:0000213!7.08e-07!57;CL:0000215!7.08e-07!57;CL:0000220!8.38e-07!246 | |ontology_enrichment_celltype=CL:0000055!9.99e-19!180;CL:0000057!4.67e-17!75;CL:0000222!7.20e-17!119;CL:0000183!2.31e-14!59;CL:0000187!7.11e-12!54;CL:0000680!2.09e-11!57;CL:0000056!2.09e-11!57;CL:0000355!2.09e-11!57;CL:0000393!1.58e-10!60;CL:0000211!1.58e-10!60;CL:0000192!2.29e-09!42;CL:0000514!2.29e-09!42;CL:0000630!2.18e-07!9;CL:0002620!4.14e-07!23;CL:0000213!7.08e-07!57;CL:0000215!7.08e-07!57;CL:0000220!8.38e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000187;6.01e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.03e-16,121;CL:0000187,9.14e-12,55;CL:0000057,1.06e-11,76;CL:0000680,1.15e-11,58;CL:0000056,1.15e-11,58;CL:0000355,1.15e-11,58;CL:0000393,8.47e-10,61;CL:0000211,8.47e-10,61;CL:0000192,5.77e-09,43;CL:0000514,5.77e-09,43 | |||
|ontology_enrichment_development_v019=CL:0000355;4.06e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.15e-07!14 | |ontology_enrichment_disease=DOID:2394!1.15e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.62e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.05e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0011135;2.52e-08;5!UBERON:0002216;2.52e-08;5!UBERON:0011134;2.52e-08;5!UBERON:0002209;2.52e-08;5!UBERON:0002213;2.52e-08;5!UBERON:0007844;2.52e-08;5!UBERON:0011138;2.52e-08;5!UBERON:0001130;2.52e-08;5!UBERON:0001066;2.52e-08;5!UBERON:0001468;2.52e-08;5!UBERON:0002067;8.36e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.70e-16,78;UBERON:0002329,1.39e-14,71;UBERON:0003059,1.39e-14,71;UBERON:0007282,1.39e-14,71;UBERON:0004290,1.39e-14,71;UBERON:0009618,1.39e-14,71;UBERON:0003077,3.16e-14,72;UBERON:0007285,3.16e-14,72;UBERON:0007524,7.02e-14,73;UBERON:0000486,9.58e-13,83;UBERON:0005256,2.85e-12,122;UBERON:0000119,9.89e-11,309;UBERON:0001134,2.31e-10,62;UBERON:0002036,2.31e-10,62;UBERON:0003082,2.31e-10,62;UBERON:0000483,4.76e-10,306;UBERON:0003104,7.49e-10,160;UBERON:0009142,7.49e-10,160;UBERON:0002385,8.86e-10,64;UBERON:0001015,8.86e-10,64;UBERON:0000383,8.86e-10,64;UBERON:0000490,2.09e-09,148;UBERON:0011135,2.44e-08,5;UBERON:0002216,2.44e-08,5;UBERON:0011134,2.44e-08,5;UBERON:0002209,2.44e-08,5;UBERON:0002213,2.44e-08,5;UBERON:0005856,2.44e-08,5;UBERON:0005866,2.44e-08,5;UBERON:0005863,2.44e-08,5;UBERON:0007844,2.44e-08,5;UBERON:0011138,2.44e-08,5;UBERON:0001130,2.44e-08,5;UBERON:0001066,2.44e-08,5;UBERON:0001468,2.44e-08,5;UBERON:0002049,1.42e-07,78;UBERON:0007798,1.42e-07,78 | |||
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| ||
|short_description=p@chr3:170150588..170150600,+ | |short_description=p@chr3:170150588..170150600,+ | ||
}} | }} |
Latest revision as of 18:10, 29 July 2015
Short description: | p@chr3:170150588..170150600, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170150588..170150600, + |
Coexpression cluster: | C635_Fibroblast_Pericytes_Nucleus_Preadipocyte_Smooth_mesothelioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.03e-16 | 121 |
muscle cell | 9.14e-12 | 55 |
fibroblast | 1.06e-11 | 76 |
muscle precursor cell | 1.15e-11 | 58 |
myoblast | 1.15e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.15e-11 | 58 |
electrically responsive cell | 8.47e-10 | 61 |
electrically active cell | 8.47e-10 | 61 |
smooth muscle cell | 5.77e-09 | 43 |
smooth muscle myoblast | 5.77e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.05e-09 | 14 |