FFCP PHASE1:Hg19::chr3:181431124..181431130,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:181431124..181431130,+ to FFCP PHASE1:Hg19::chr3:181431124..181431130,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:181431124..181431130,+ | |||
|coexpression_cluster_id=C1056 | |||
|description=CAGE_peak_at_chr3:181431124..181431130,+ | |||
|id=chr3:181431124..181431130,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.37e-16!25;CL:0000047!1.13e-14!8;CL:0000540!1.74e-11!6;CL:0000031!1.74e-11!6;CL:0000404!1.74e-11!6;CL:0000133!3.89e-10!59;CL:0002322!4.66e-10!5;CL:0000221!3.61e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.06e-22;5!CL:0000540;9.13e-19;6!CL:0000404;9.13e-19;6!CL:0002605;4.44e-14;3!CL:0002319;5.12e-12;25!CL:0002321;2.39e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.99e-22,5;CL:0000047,5.86e-20,8;CL:0000540,1.22e-18,6;CL:0000031,1.22e-18,6;CL:0000404,1.22e-18,6;CL:0002605,4.67e-14,3;CL:0002319,5.63e-12,25;CL:0000133,9.06e-10,59;CL:0000221,1.38e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;9.13e-19;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.94e-56!82;UBERON:0005743!1.63e-54!86;UBERON:0000073!1.63e-53!94;UBERON:0001016!1.63e-53!94;UBERON:0001049!1.55e-50!57;UBERON:0005068!1.55e-50!57;UBERON:0006241!1.55e-50!57;UBERON:0007135!1.55e-50!57;UBERON:0002780!8.90e-44!41;UBERON:0001890!8.90e-44!41;UBERON:0006240!8.90e-44!41;UBERON:0003080!1.75e-42!42;UBERON:0001893!7.88e-42!34;UBERON:0002020!8.64e-42!34;UBERON:0003528!8.64e-42!34;UBERON:0002346!1.55e-41!90;UBERON:0002616!2.45e-41!59;UBERON:0002791!1.73e-40!33;UBERON:0000955!7.02e-40!69;UBERON:0006238!7.02e-40!69;UBERON:0003075!8.35e-39!86;UBERON:0007284!8.35e-39!86;UBERON:0001869!1.55e-38!32;UBERON:0000924!4.87e-37!173;UBERON:0006601!4.87e-37!173;UBERON:0004121!1.35e-34!169;UBERON:0003056!4.23e-33!61;UBERON:0000956!2.30e-28!25;UBERON:0000203!2.30e-28!25;UBERON:0000033!9.94e-28!123;UBERON:0000153!7.23e-27!129;UBERON:0007811!7.23e-27!129;UBERON:0002619!1.48e-23!22;UBERON:0001950!1.24e-20!20;UBERON:0007023!1.31e-20!115;UBERON:0002308!5.62e-15!9;UBERON:0000125!5.62e-15!9;UBERON:0009663!2.99e-12!7;UBERON:0002420!3.44e-12!9;UBERON:0007245!3.44e-12!9;UBERON:0010009!3.44e-12!9;UBERON:0010011!3.44e-12!9;UBERON:0000454!3.44e-12!9;UBERON:0000064!2.53e-10!219;UBERON:0000025!7.08e-10!194;UBERON:0003076!1.76e-09!15;UBERON:0003057!1.76e-09!15;UBERON:0000922!3.58e-09!612;UBERON:0004111!7.26e-09!241;UBERON:0001872!1.45e-08!5;UBERON:0001871!4.95e-08!7;UBERON:0000369!1.51e-07!4;UBERON:0002435!1.51e-07!4;UBERON:0000204!1.51e-07!4;UBERON:0010082!1.51e-07!4;UBERON:0000200!2.15e-07!6;UBERON:0002298!2.75e-07!8;UBERON:0000468!4.23e-07!659;UBERON:0000477!5.11e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.75e-25;32!UBERON:0003528;2.38e-24;34!UBERON:0002020;2.38e-24;34!UBERON:0001893;4.60e-22;34!UBERON:0001869;1.09e-21;32!UBERON:0000956;1.05e-18;25!UBERON:0000203;1.05e-18;25!UBERON:0002780;1.26e-16;41!UBERON:0001890;1.26e-16;41!UBERON:0000073;1.39e-16;53!UBERON:0002616;1.39e-16;53!UBERON:0002420;3.74e-12;9!UBERON:0000125;3.74e-12;9!UBERON:0007245;3.74e-12;9!UBERON:0002308;3.74e-12;9!UBERON:0010009;3.74e-12;9!UBERON:0010011;3.74e-12;9!UBERON:0000454;3.74e-12;9!UBERON:0002619;2.61e-11;22!UBERON:0009663;2.23e-10;7!UBERON:0001950;1.13e-09;20!UBERON:0001016;1.35e-09;83!UBERON:0000955;4.50e-09;68!UBERON:0000922;5.33e-08;49!UBERON:0001017;9.10e-08;75!UBERON:0005383;9.61e-07;3!UBERON:0005382;9.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.49e-31,81;UBERON:0001016,1.23e-29,89;UBERON:0003528,2.84e-29,34;UBERON:0002020,2.84e-29,34;UBERON:0002791,2.75e-27,32;UBERON:0001049,5.56e-27,56;UBERON:0005068,5.56e-27,56;UBERON:0006241,5.56e-27,56;UBERON:0007135,5.56e-27,56;UBERON:0000073,1.33e-25,53;UBERON:0002616,1.33e-25,53;UBERON:0001893,1.57e-25,34;UBERON:0002780,8.24e-24,41;UBERON:0001890,8.24e-24,41;UBERON:0003080,8.24e-24,41;UBERON:0006240,8.24e-24,41;UBERON:0001869,1.65e-23,32;UBERON:0003075,4.10e-19,82;UBERON:0007284,4.10e-19,82;UBERON:0000956,6.28e-19,25;UBERON:0000203,6.28e-19,25;UBERON:0000955,9.95e-19,68;UBERON:0006238,9.95e-19,68;UBERON:0002346,5.23e-18,86;UBERON:0003056,3.72e-17,61;UBERON:0004121,3.08e-15,171;UBERON:0000924,3.08e-15,171;UBERON:0006601,3.08e-15,171;UBERON:0010371,4.42e-14,104;UBERON:0010314,1.71e-12,132;UBERON:0000125,3.18e-12,9;UBERON:0002308,3.18e-12,9;UBERON:0002420,3.42e-12,9;UBERON:0007245,3.42e-12,9;UBERON:0010009,3.42e-12,9;UBERON:0010011,3.42e-12,9;UBERON:0000454,3.42e-12,9;UBERON:0011216,4.09e-12,223;UBERON:0002619,1.70e-11,22;UBERON:0009663,2.60e-10,7;UBERON:0001950,7.21e-10,20 | |||
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| ||
|short_description=p@chr3:181431124..181431130,+ | |||
}} | }} |
Latest revision as of 18:36, 29 July 2015
Short description: | p@chr3:181431124..181431130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:181431124..181431130, + |
Coexpression cluster: | C1056_small_Neural_Astrocyte_teratocarcinoma_H9_hippocampus_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.99e-22 | 5 |
neuronal stem cell | 5.86e-20 | 8 |
neuron | 1.22e-18 | 6 |
neuroblast | 1.22e-18 | 6 |
electrically signaling cell | 1.22e-18 | 6 |
astrocyte of the cerebral cortex | 4.67e-14 | 3 |
neural cell | 5.63e-12 | 25 |
neurectodermal cell | 9.06e-10 | 59 |
ectodermal cell | 1.38e-07 | 72 |