FFCP PHASE1:Hg19::chr3:42888864..42888881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:42888864..42888881,+ | |||
|coexpression_cluster_id=C2740 | |||
|description=CAGE_peak_at_chr3:42888864..42888881,+ | |description=CAGE_peak_at_chr3:42888864..42888881,+ | ||
|id=chr3:42888864..42888881,+ | |id=chr3:42888864..42888881,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.85e-15!172;CL:0000566!1.85e-15!172;CL:0002032!3.82e-15!165;CL:0000837!3.82e-15!165;CL:0000763!4.36e-14!112;CL:0000049!4.36e-14!112;CL:0000988!5.31e-14!182;CL:0002031!1.20e-08!124;CL:0000738!4.65e-08!140;CL:0000766!7.95e-08!76;CL:0000839!9.21e-08!70;CL:0000557!5.65e-07!71;CL:0002087!6.30e-07!119;CL:0002057!7.93e-07!42 | |ontology_enrichment_celltype=CL:0000037!1.85e-15!172;CL:0000566!1.85e-15!172;CL:0002032!3.82e-15!165;CL:0000837!3.82e-15!165;CL:0000763!4.36e-14!112;CL:0000049!4.36e-14!112;CL:0000988!5.31e-14!182;CL:0002031!1.20e-08!124;CL:0000738!4.65e-08!140;CL:0000766!7.95e-08!76;CL:0000839!9.21e-08!70;CL:0000557!5.65e-07!71;CL:0002087!6.30e-07!119;CL:0002057!7.93e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.11e-13;5!CL:0000163;4.05e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.22e-12,5;CL:0002028,1.22e-12,5;CL:0000763,4.62e-08,108;CL:0000049,4.62e-08,108;CL:0000163,5.04e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!4.63e-15!39;DOID:2531!5.29e-14!51;DOID:0060083!5.29e-14!51;DOID:8692!2.99e-13!31 | |ontology_enrichment_disease=DOID:1240!4.63e-15!39;DOID:2531!5.29e-14!51;DOID:0060083!5.29e-14!51;DOID:8692!2.99e-13!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;9.79e-23;31!DOID:1240;3.22e-18;39!DOID:2531;2.12e-11;51!DOID:0060083;2.12e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.91e-24,39;DOID:8692,2.36e-24,31;DOID:2531,6.96e-20,51;DOID:0060083,6.96e-20,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.20e-24!115;UBERON:0001049!7.28e-13!57;UBERON:0005068!7.28e-13!57;UBERON:0006241!7.28e-13!57;UBERON:0007135!7.28e-13!57;UBERON:0002193!1.98e-11!112;UBERON:0002780!4.57e-11!41;UBERON:0001890!4.57e-11!41;UBERON:0006240!4.57e-11!41;UBERON:0001893!7.41e-11!34;UBERON:0003080!1.29e-10!42;UBERON:0002020!2.22e-10!34;UBERON:0003528!2.22e-10!34;UBERON:0002405!4.38e-10!115;UBERON:0002791!4.50e-10!33;UBERON:0002616!4.52e-10!59;UBERON:0001017!4.80e-10!82;UBERON:0005743!8.70e-10!86;UBERON:0000955!1.12e-09!69;UBERON:0006238!1.12e-09!69;UBERON:0001869!3.09e-09!32;UBERON:0002390!9.21e-09!102;UBERON:0003061!9.21e-09!102;UBERON:0000073!8.31e-08!94;UBERON:0001016!8.31e-08!94;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0002308!3.98e-07!9;UBERON:0000125!3.98e-07!9;UBERON:0002619!5.37e-07!22;UBERON:0002346!8.92e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.75e-10;34!UBERON:0000073;4.17e-10;53!UBERON:0002616;4.17e-10;53!UBERON:0002780;1.55e-09;41!UBERON:0001890;1.55e-09;41!UBERON:0001869;2.81e-08;32!UBERON:0002791;2.97e-08;32!UBERON:0003528;1.39e-07;34!UBERON:0002020;1.39e-07;34!UBERON:0001950;2.17e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.97e-14,56;UBERON:0005068,1.97e-14,56;UBERON:0006241,1.97e-14,56;UBERON:0007135,1.97e-14,56;UBERON:0000073,1.66e-13,53;UBERON:0002616,1.66e-13,53;UBERON:0001893,2.40e-12,34;UBERON:0002780,1.01e-11,41;UBERON:0001890,1.01e-11,41;UBERON:0003080,1.01e-11,41;UBERON:0006240,1.01e-11,41;UBERON:0001017,6.64e-10,81;UBERON:0000955,1.38e-09,68;UBERON:0006238,1.38e-09,68;UBERON:0002791,5.08e-09,32;UBERON:0001869,5.38e-09,32;UBERON:0007023,6.74e-09,114;UBERON:0003075,1.08e-08,82;UBERON:0007284,1.08e-08,82;UBERON:0001016,1.53e-08,89;UBERON:0003528,2.13e-08,34;UBERON:0002020,2.13e-08,34;UBERON:0002346,4.01e-08,86;UBERON:0001950,2.08e-07,20;UBERON:0003056,4.59e-07,61;UBERON:0002420,9.43e-07,9;UBERON:0007245,9.43e-07,9;UBERON:0010009,9.43e-07,9;UBERON:0010011,9.43e-07,9;UBERON:0000454,9.43e-07,9 | |||
|phase1_expression=1.63510541343501,0.428201047781966,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.57470412614962,0.236132343941038,0,0.383829398097213,0,0,0,0,1.08454080812422,0,0.587200878669695,0,0.200544447470142,0,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0.822335776043652,0.309706370895104,0.575384784644301,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0.598390972864896,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.637812899895131,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,2.01414658554573,4.56163263431108,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.01056513432752,0.462985512576611,1.90254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,11.3312544716067,24.917706825743,1.03664057770386,2.45003920808834,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.896681151948218,0.197030760201927,0.431255149719035,0,0,0,0,0.335032530668698,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0.744323423456331,0,0,0.512556597022804,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,4.32807638929335,0,0.159426272728822,1.1974762285969,0.191505370132367,0.211673582723883,2.27235358192189,0,0,0,2.50634477090067,0,0,0.201799707191048,1.27753871307098,0.687010689511529,6.45205605047762,5.81557880520281,8.67615536901924,9.76940477010202,0,0,2.97501246323581,16.3205264318932,0,0,0,0,4.56917875537661,0,0,0,0,0,1.54736358051564,0,0,0,0,0,0,0.102268682502155,0,0,0,0,4.09257896181497,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,1.09886179476517,3.49044531990328,0,0.980312671588698,0.503464760927528,0.189753732724185,1.27149263184303,0,0,0,0,0,0.0884575645033392,0,0,0,0,3.2352543830725,1.60515529459758,0.937057782901357,0,0,0,0,0,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,1.26621591911757,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,1.9166753044879,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,1.02418136999391,0.988990300573997,0.606631894687664,0,0.592713324460491,0.795229689809303,0.817220436669454,0,0,0,0,0,1.45798935979259,0,0.315222829196793,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,4.4329961204643,0,0,1.75862680413699,1.32506888912221,0.258565912723101,0.79339561045614,0,0,0.640724475406168,0.628817220398664,0.414239055347196,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,1.77213635993397,0,0.751145584238999,0,1.44207766997908,2.67014532647949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.19998739585493,3.73421053929493,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,1.79841830270087,0,0.478901577171454,0,0,0.899044282034833,0.484426936895553,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,1.35075169236789,0,0.620060389503552,1.26831620387814,0,0,0,0,0,0,0.672567444437648,0,0,0.177404740325278,0.345701962667338,0,2.51488012014277,1.44700101838268,0,0,0.156986185701028,0.628462359664008,0,0.913158720509496,0,0,0.78624198594322,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0.397901550322736,0,0,0,8.60488208330039,0.308696632431779,0.437119121007915,0,0,0,0.785233868459781,1.78227840196252,0,0,0.845855261818682,0.45120521581504,0,0,0,0,0,0,1.57673541466596,0,1.08786384305464,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,1.65492793379032,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,0,0,1.077632848233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|phase1_expression=1.63510541343501,0.428201047781966,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.57470412614962,0.236132343941038,0,0.383829398097213,0,0,0,0,1.08454080812422,0,0.587200878669695,0,0.200544447470142,0,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0.822335776043652,0.309706370895104,0.575384784644301,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0.598390972864896,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.637812899895131,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,2.01414658554573,4.56163263431108,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.01056513432752,0.462985512576611,1.90254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,11.3312544716067,24.917706825743,1.03664057770386,2.45003920808834,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.896681151948218,0.197030760201927,0.431255149719035,0,0,0,0,0.335032530668698,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0.744323423456331,0,0,0.512556597022804,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,4.32807638929335,0,0.159426272728822,1.1974762285969,0.191505370132367,0.211673582723883,2.27235358192189,0,0,0,2.50634477090067,0,0,0.201799707191048,1.27753871307098,0.687010689511529,6.45205605047762,5.81557880520281,8.67615536901924,9.76940477010202,0,0,2.97501246323581,16.3205264318932,0,0,0,0,4.56917875537661,0,0,0,0,0,1.54736358051564,0,0,0,0,0,0,0.102268682502155,0,0,0,0,4.09257896181497,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,1.09886179476517,3.49044531990328,0,0.980312671588698,0.503464760927528,0.189753732724185,1.27149263184303,0,0,0,0,0,0.0884575645033392,0,0,0,0,3.2352543830725,1.60515529459758,0.937057782901357,0,0,0,0,0,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,1.26621591911757,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,1.9166753044879,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,1.02418136999391,0.988990300573997,0.606631894687664,0,0.592713324460491,0.795229689809303,0.817220436669454,0,0,0,0,0,1.45798935979259,0,0.315222829196793,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,4.4329961204643,0,0,1.75862680413699,1.32506888912221,0.258565912723101,0.79339561045614,0,0,0.640724475406168,0.628817220398664,0.414239055347196,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,1.77213635993397,0,0.751145584238999,0,1.44207766997908,2.67014532647949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.19998739585493,3.73421053929493,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,1.79841830270087,0,0.478901577171454,0,0,0.899044282034833,0.484426936895553,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,1.35075169236789,0,0.620060389503552,1.26831620387814,0,0,0,0,0,0,0.672567444437648,0,0,0.177404740325278,0.345701962667338,0,2.51488012014277,1.44700101838268,0,0,0.156986185701028,0.628462359664008,0,0.913158720509496,0,0,0.78624198594322,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0.397901550322736,0,0,0,8.60488208330039,0.308696632431779,0.437119121007915,0,0,0,0.785233868459781,1.78227840196252,0,0,0.845855261818682,0.45120521581504,0,0,0,0,0,0,1.57673541466596,0,1.08786384305464,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,1.65492793379032,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,0,0,1.077632848233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| ||
|short_description=p@chr3:42888864..42888881,+ | |short_description=p@chr3:42888864..42888881,+ | ||
}} | }} |
Latest revision as of 21:05, 29 July 2015
Short description: | p@chr3:42888864..42888881, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42888864..42888881, + |
Coexpression cluster: | C2740_Mast_acute_small_leukemia_chronic_biphenotypic_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.22e-12 | 5 |
basophil mast progenitor cell | 1.22e-12 | 5 |
myeloid cell | 4.62e-08 | 108 |
common myeloid progenitor | 4.62e-08 | 108 |
endocrine cell | 5.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.97e-14 | 56 |
neural rod | 1.97e-14 | 56 |
future spinal cord | 1.97e-14 | 56 |
neural keel | 1.97e-14 | 56 |
regional part of nervous system | 1.66e-13 | 53 |
regional part of brain | 1.66e-13 | 53 |
telencephalon | 2.40e-12 | 34 |
regional part of forebrain | 1.01e-11 | 41 |
forebrain | 1.01e-11 | 41 |
anterior neural tube | 1.01e-11 | 41 |
future forebrain | 1.01e-11 | 41 |
central nervous system | 6.64e-10 | 81 |
brain | 1.38e-09 | 68 |
future brain | 1.38e-09 | 68 |
regional part of telencephalon | 5.08e-09 | 32 |
cerebral hemisphere | 5.38e-09 | 32 |
adult organism | 6.74e-09 | 114 |
neural plate | 1.08e-08 | 82 |
presumptive neural plate | 1.08e-08 | 82 |
nervous system | 1.53e-08 | 89 |
brain grey matter | 2.13e-08 | 34 |
gray matter | 2.13e-08 | 34 |
neurectoderm | 4.01e-08 | 86 |
neocortex | 2.08e-07 | 20 |
pre-chordal neural plate | 4.59e-07 | 61 |
basal ganglion | 9.43e-07 | 9 |
nuclear complex of neuraxis | 9.43e-07 | 9 |
aggregate regional part of brain | 9.43e-07 | 9 |
collection of basal ganglia | 9.43e-07 | 9 |
cerebral subcortex | 9.43e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.91e-24 | 39 |
myeloid leukemia | 2.36e-24 | 31 |
hematologic cancer | 6.96e-20 | 51 |
immune system cancer | 6.96e-20 | 51 |