FFCP PHASE1:Hg19::chr4:143489408..143489419,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:143489408..143489419,- | |||
|coexpression_cluster_id=C4375 | |coexpression_cluster_id=C4375 | ||
|description=CAGE_peak_at_chr4:143489408..143489419,- | |description=CAGE_peak_at_chr4:143489408..143489419,- | ||
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|ontology_enrichment_celltype=CL:0000791!1.86e-18!18;CL:0000789!1.86e-18!18;CL:0002420!1.86e-18!18;CL:0002419!1.86e-18!18;CL:0000790!1.86e-18!18;CL:0000838!1.02e-13!52;CL:0000542!2.37e-13!53;CL:0000051!2.37e-13!53;CL:0000084!2.36e-12!25;CL:0000827!2.36e-12!25;CL:0000625!4.49e-12!11;CL:0000624!2.15e-09!6;CL:0002087!1.00e-08!119;CL:0000623!1.74e-07!3;CL:0000825!1.74e-07!3;CL:0000898!3.22e-07!3;CL:0000842!5.18e-07!3;CL:0000738!5.21e-07!140;CL:0002231!6.55e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.86e-18!18;CL:0000789!1.86e-18!18;CL:0002420!1.86e-18!18;CL:0002419!1.86e-18!18;CL:0000790!1.86e-18!18;CL:0000838!1.02e-13!52;CL:0000542!2.37e-13!53;CL:0000051!2.37e-13!53;CL:0000084!2.36e-12!25;CL:0000827!2.36e-12!25;CL:0000625!4.49e-12!11;CL:0000624!2.15e-09!6;CL:0002087!1.00e-08!119;CL:0000623!1.74e-07!3;CL:0000825!1.74e-07!3;CL:0000898!3.22e-07!3;CL:0000842!5.18e-07!3;CL:0000738!5.21e-07!140;CL:0002231!6.55e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.43e-11;1 | |ontology_enrichment_development_v019=UBERON:0006242;7.43e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002294!2.93e-08!7;UBERON:0001173!2.93e-08!7;UBERON:0004912!2.93e-08!7;UBERON:0005409!7.26e-07!35;UBERON:0000160!9.06e-07!27 | |ontology_enrichment_uberon=UBERON:0002294!2.93e-08!7;UBERON:0001173!2.93e-08!7;UBERON:0004912!2.93e-08!7;UBERON:0005409!7.26e-07!35;UBERON:0000160!9.06e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.05e-18;17!UBERON:0002108;5.88e-18;4!UBERON:0005409;1.48e-14;22!UBERON:0002294;8.39e-13;7!UBERON:0001173;8.39e-13;7!UBERON:0004913;7.43e-11;1!UBERON:0003703;7.43e-11;1!UBERON:0001174;7.43e-11;1!UBERON:0004914;7.43e-11;1!UBERON:0002394;1.86e-10;4!UBERON:0003928;1.86e-10;4!UBERON:0001155;4.44e-10;9!UBERON:0004921;8.85e-10;33!UBERON:0000059;2.45e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.05e-18;17!UBERON:0002108;5.88e-18;4!UBERON:0005409;1.48e-14;22!UBERON:0002294;8.39e-13;7!UBERON:0001173;8.39e-13;7!UBERON:0004913;7.43e-11;1!UBERON:0003703;7.43e-11;1!UBERON:0001174;7.43e-11;1!UBERON:0004914;7.43e-11;1!UBERON:0002394;1.86e-10;4!UBERON:0003928;1.86e-10;4!UBERON:0001155;4.44e-10;9!UBERON:0004921;8.85e-10;33!UBERON:0000059;2.45e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.24e-19,17;UBERON:0002108,3.95e-18,4;UBERON:0005409,4.24e-13,25;UBERON:0004913,5.05e-11,1;UBERON:0003703,5.05e-11,1;UBERON:0001174,5.05e-11,1;UBERON:0004914,5.05e-11,1;UBERON:0001155,2.23e-10,9;UBERON:0002294,3.16e-10,9;UBERON:0001173,3.16e-10,9;UBERON:0004912,3.16e-10,9;UBERON:0000059,1.40e-08,11;UBERON:0002394,2.23e-07,6;UBERON:0003928,2.23e-07,6 | |||
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| ||
|short_description=p@chr4:143489408..143489419,- | |short_description=p@chr4:143489408..143489419,- | ||
}} | }} |
Latest revision as of 01:55, 30 July 2015
Short description: | p@chr4:143489408..143489419, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:143489408..143489419, - |
Coexpression cluster: | C4375_small_adenocarcinoma_signet_colon_CD4_papillotubular_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.24e-19 | 17 |
small intestine | 3.95e-18 | 4 |
gastrointestinal system | 4.24e-13 | 25 |
hepatopancreatic ampulla | 5.05e-11 | 1 |
extrahepatic bile duct | 5.05e-11 | 1 |
common bile duct | 5.05e-11 | 1 |
duodenal papilla | 5.05e-11 | 1 |
colon | 2.23e-10 | 9 |
biliary system | 3.16e-10 | 9 |
biliary tree | 3.16e-10 | 9 |
biliary bud | 3.16e-10 | 9 |
large intestine | 1.40e-08 | 11 |
bile duct | 2.23e-07 | 6 |
digestive system duct | 2.23e-07 | 6 |