FFCP PHASE1:Hg19::chr4:24645959..24645967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:24645959..24645967,+ | |||
|description=CAGE_peak_at_chr4:24645959..24645967,+ | |description=CAGE_peak_at_chr4:24645959..24645967,+ | ||
|id=chr4:24645959..24645967,+ | |id=chr4:24645959..24645967,+ | ||
|ontology_enrichment_celltype=CL:0000064!9.36e-10!3;CL:0005012!9.36e-10!3;CL:0000067!9.36e-10!3;CL:0002304!9.36e-10!3;CL:0002591!1.13e-08!1;CL:0000819!2.33e-08!1 | |ontology_enrichment_celltype=CL:0000064!9.36e-10!3;CL:0005012!9.36e-10!3;CL:0000067!9.36e-10!3;CL:0002304!9.36e-10!3;CL:0002591!1.13e-08!1;CL:0000819!2.33e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002591;4.66e-66;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.66e-66,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.12e-11!10;DOID:162!5.74e-09!235;DOID:14566!1.07e-08!239;DOID:0060073!2.33e-08!1;DOID:8675!2.33e-08!1;DOID:5662!2.50e-08!1;DOID:3112!2.89e-08!1;DOID:2355!7.16e-08!1;DOID:2531!1.13e-07!51;DOID:0060083!1.13e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.93e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.13e-08,10;DOID:1240,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001778!9.36e-10!3;UBERON:0001775!9.36e-10!3;UBERON:0000488!1.57e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;7.04e-34;2!UBERON:0002012;7.04e-34;2!UBERON:0008886;7.04e-34;2!UBERON:0010313;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.05e-34,2;UBERON:0007497,7.05e-34,2;UBERON:0003643,7.05e-34,2;UBERON:0003504,7.05e-34,2;UBERON:0003469,7.05e-34,2;UBERON:0003496,7.05e-34,2;UBERON:0002012,7.05e-34,2;UBERON:0008886,7.05e-34,2;UBERON:0007303,7.05e-34,2;UBERON:0002061,7.05e-34,2;UBERON:0005432,7.05e-34,2;UBERON:0004363,7.05e-34,2;UBERON:0004145,4.09e-23,3;UBERON:0003498,1.83e-14,5;UBERON:0005985,1.83e-14,5;UBERON:0010188,2.74e-12,6;UBERON:0002539,2.74e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0008816,2.74e-12,6;UBERON:0000485,1.21e-08,9;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p@chr4:24645959..24645967,+ | |short_description=p@chr4:24645959..24645967,+ | ||
}} | }} |
Latest revision as of 04:30, 30 July 2015
Short description: | p@chr4:24645959..24645967, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:24645959..24645967, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.66e-66 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.05e-34 | 2 |
developing epithelial placode | 7.05e-34 | 2 |
respiratory system arterial blood vessel | 7.05e-34 | 2 |
respiratory system blood vessel | 7.05e-34 | 2 |
respiratory system artery | 7.05e-34 | 2 |
head blood vessel | 7.05e-34 | 2 |
pulmonary artery | 7.05e-34 | 2 |
pulmonary vascular system | 7.05e-34 | 2 |
pharyngeal vasculature | 7.05e-34 | 2 |
truncus arteriosus | 7.05e-34 | 2 |
aortic sac | 7.05e-34 | 2 |
pharyngeal arch artery | 7.05e-34 | 2 |
outflow tract | 4.09e-23 | 3 |
heart blood vessel | 1.83e-14 | 5 |
coronary vessel | 1.83e-14 | 5 |
protuberance | 2.74e-12 | 6 |
pharyngeal arch | 2.74e-12 | 6 |
pharyngeal epithelium | 2.74e-12 | 6 |
embryonic head | 2.74e-12 | 6 |
simple columnar epithelium | 1.21e-08 | 9 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |