FFCP PHASE1:Hg19::chr4:57774042..57774114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5978 | |EntrezGene=entrezgene:5978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9966 | |HGNC=HGNC:9966 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q13127,A0PJ83 | |UniProt=uniprot:Q13127,uniprot:A0PJ83 | ||
|association_with_transcript=0bp_to_ENST00000309042,ENST00000456010,NM_005612,uc003hch.2_5end | |association_with_transcript=0bp_to_ENST00000309042,ENST00000456010,NM_005612,uc003hch.2_5end | ||
|cluster_id=chr4:57774042..57774114,+ | |||
|description=CAGE_peak_1_at_REST_5end | |description=CAGE_peak_1_at_REST_5end | ||
|id=chr4:57774042..57774114,+ | |id=chr4:57774042..57774114,+ | ||
Revision as of 05:51, 30 July 2015
| Short description: | p1@REST |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_REST_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000309042, ENST00000456010, NM_005612, uc003hch.2_5end |
| EntrezGene: | 5978 |
| HGNC: | 9966 |
| UniProt: | Q13127A0PJ83 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@REST |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid cell | 6.12e-18 | 108 |
| common myeloid progenitor | 6.12e-18 | 108 |
| myeloid leukocyte | 1.14e-15 | 72 |
| hematopoietic stem cell | 3.31e-15 | 168 |
| hematopoietic oligopotent progenitor cell | 7.45e-14 | 161 |
| hematopoietic multipotent progenitor cell | 7.45e-14 | 161 |
| granulocyte monocyte progenitor cell | 4.35e-13 | 67 |
| hematopoietic cell | 6.43e-13 | 177 |
| leukocyte | 1.08e-12 | 136 |
| myeloid lineage restricted progenitor cell | 3.63e-11 | 66 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| bone element | 2.74e-11 | 82 |
| bone marrow | 2.85e-10 | 76 |
| hematopoietic system | 3.04e-10 | 98 |
| blood island | 3.04e-10 | 98 |
| immune system | 3.94e-10 | 93 |
| skeletal element | 1.75e-09 | 90 |
| hemolymphoid system | 2.31e-09 | 108 |
| skeletal system | 2.90e-08 | 100 |
Showing 1 to 8 of 8 entries
