FFCP PHASE1:Hg19::chr5:140887632..140887652,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:140887632..140887652,+ | |||
|coexpression_cluster_id=C4468 | |||
|description=CAGE_peak_at_chr5:140887632..140887652,+ | |||
|id=chr5:140887632..140887652,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.48e-41!180;CL:0000057!1.01e-19!75;CL:0000680!6.17e-17!57;CL:0000056!6.17e-17!57;CL:0000355!6.17e-17!57;CL:0000183!4.04e-16!59;CL:0000187!9.00e-16!54;CL:0000393!1.22e-13!60;CL:0000211!1.22e-13!60;CL:0000048!2.53e-13!430;CL:0000192!3.44e-13!42;CL:0000514!3.44e-13!42;CL:0000723!1.28e-12!436;CL:0000034!1.12e-11!444;CL:0000359!1.09e-10!32;CL:0002620!3.06e-07!23;CL:0002371!4.80e-07!591;CL:0002570!9.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.13e-10;8!CL:0000134;4.12e-09;55!CL:0000723;5.12e-09;61!CL:0000048;1.77e-08;58!CL:0002559;1.82e-07;5!CL:0000359;2.41e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,9.48e-16,427;CL:0000723,4.12e-15,433;CL:0000034,2.73e-14,441;CL:0002320,4.92e-13,361;CL:0000057,6.65e-13,76;CL:0002570,8.25e-11,8;CL:0000134,7.28e-10,354;CL:0000219,6.80e-08,386;CL:0000359,1.04e-07,32;CL:0002559,1.25e-07,5;CL:0000187,2.82e-07,55;CL:0000680,2.87e-07,58;CL:0000056,2.87e-07,58;CL:0000355,2.87e-07,58;CL:0000192,4.25e-07,43;CL:0000514,4.25e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.03e-24!83;UBERON:0002329!9.03e-24!83;UBERON:0003077!9.03e-24!83;UBERON:0003059!9.03e-24!83;UBERON:0007282!9.03e-24!83;UBERON:0009618!9.03e-24!83;UBERON:0007285!9.03e-24!83;UBERON:0004290!7.62e-21!70;UBERON:0000486!1.80e-17!82;UBERON:0002385!3.75e-17!63;UBERON:0001015!3.75e-17!63;UBERON:0000383!3.75e-17!63;UBERON:0001134!1.59e-16!61;UBERON:0002036!1.59e-16!61;UBERON:0003082!1.59e-16!61;UBERON:0005256!6.13e-14!143;UBERON:0003102!1.50e-09!95;UBERON:0001637!1.77e-07!42;UBERON:0003509!1.77e-07!42;UBERON:0004572!1.77e-07!42;UBERON:0001013!2.41e-07!14;UBERON:0002384!4.13e-07!375;UBERON:0002100!5.89e-07!216;UBERON:0002199!7.29e-07!45;UBERON:0002416!7.29e-07!45;UBERON:0004573!8.50e-07!33;UBERON:0004571!8.50e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.72e-12;14!UBERON:0004905;3.35e-09;8!UBERON:0000982;3.35e-09;8!UBERON:0004770;3.35e-09;8!UBERON:0002204;2.13e-08;70!UBERON:0000075;3.13e-08;16!UBERON:0001434;5.85e-08;36!UBERON:0011135;1.24e-07;5!UBERON:0002216;1.24e-07;5!UBERON:0011134;1.24e-07;5!UBERON:0002209;1.24e-07;5!UBERON:0002213;1.24e-07;5!UBERON:0007844;1.24e-07;5!UBERON:0011138;1.24e-07;5!UBERON:0001130;1.24e-07;5!UBERON:0001066;1.24e-07;5!UBERON:0001468;1.24e-07;5!UBERON:0002073;1.82e-07;5!UBERON:0002384;1.91e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.15e-13,371;UBERON:0001013,7.91e-13,14;UBERON:0007524,4.06e-10,73;UBERON:0002329,6.99e-10,71;UBERON:0003059,6.99e-10,71;UBERON:0007282,6.99e-10,71;UBERON:0004290,6.99e-10,71;UBERON:0009618,6.99e-10,71;UBERON:0003077,1.25e-09,72;UBERON:0007285,1.25e-09,72;UBERON:0003102,2.36e-09,99;UBERON:0004905,3.12e-09,8;UBERON:0000982,3.12e-09,8;UBERON:0004770,3.12e-09,8;UBERON:0000486,4.97e-09,83;UBERON:0007503,2.83e-08,78;UBERON:0000075,4.05e-08,16;UBERON:0011135,1.13e-07,5;UBERON:0002216,1.13e-07,5;UBERON:0011134,1.13e-07,5;UBERON:0002209,1.13e-07,5;UBERON:0002213,1.13e-07,5;UBERON:0005856,1.13e-07,5;UBERON:0005866,1.13e-07,5;UBERON:0005863,1.13e-07,5;UBERON:0007844,1.13e-07,5;UBERON:0011138,1.13e-07,5;UBERON:0001130,1.13e-07,5;UBERON:0001066,1.13e-07,5;UBERON:0001468,1.13e-07,5;UBERON:0002073,1.25e-07,5;UBERON:0005086,1.25e-07,5;UBERON:0002204,1.42e-07,167;UBERON:0002385,2.18e-07,64;UBERON:0001015,2.18e-07,64;UBERON:0000383,2.18e-07,64;UBERON:0001134,4.03e-07,62;UBERON:0002036,4.03e-07,62;UBERON:0003082,4.03e-07,62 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,3.79031924056099,3.65659879479774,0.245733936501509,0,0,0,3.09415882400117,3.31397375727916,2.6893005858071,1.20538905604795,2.92124036154949,2.92759679274304,0.492484232307152,0.612002073732759,0,0,0,0.251085279189606,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0.154816123316076,0,0,0,0.697204805222715,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,3.97583067623023,7.01873074890245,5.35932120155048,0.795285947051099,3.89307896242109,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.90792499444274,2.28797964312051,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,2.24271040056923,0,0.24666754841716,1.24484414159907,0.269421344139376,0.326923806226917,0.454072282934794,0,1.87457145467037,2.49728061464256,1.1409436430889,1.49448680551801,0.587172493218824,0.971237666208789,0.702254033511242,2.44985005505872,0.737005903870608,3.51307655997603,3.56400857184616,1.48360157567134,1.82032272387605,2.15585442544872,1.0100166837244,0.375355559615893,1.10825646193673,1.75591048352335,1.5324389789951,2.85452311922534,0.453728732640084,0.179389635688862,4.69826255400848,3.39091041855299,0.600182192168805,2.37020817248409,0,2.23340227597908,0,0.584622030967192,1.00973509697646,4.05019554026117,6.62748832957129,0.710019185033229,0.906768884048762,0,0,0.545492241181669,0,0,0,0,0,0,0,3.12899064659632,1.92972281457866,1.38134921352481,2.3218396401599,7.21879481669586,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0,4.23550796903422,4.15973914111831,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,1.17217447210047,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,1.45770409648969,0,0.80672114403045,0.517086863031111,17.8828222925941,3.381211010224,0,0,0,0,0.799266537048298,1.00084595560703,1.08524321078289,0,1.62868092146868,0.355391948742546,0,0.602878754119172,0,0.499864955910285,0,0,0,1.4377491329495,2.29723871668228,1.42636905040718,0.868687840005475,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,2.50085260529839,2.44138521329762,0,0.713715955188647,0.473107245101804,1.17141414992713,1.80567659836631,4.5481500811197,2.0694614258501,0.664225598535437,1.10621501125022,1.12948698808508,2.93701736194111,2.05886054286514,0,0,0,0,0,0.30239029332968,1.73675465473144,0,0.280660094433074,1.02511319404561,0,0.804269605718038,1.48418066444991,0.462629081407967,1.77561725313127,0.821271560138091,1.03850885836724,0.929683027679674,0,0,0,1.37777337797528,0.182091168006717,0.917870904715969,0.451199612907412,0,0,2.92278449306521,0,0,0,0.215915916102139,0,0.812839312631559,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0.247528499761764,0,0,0,1.54673149267395,0.308097234229289,0.307007349452259,0.137836572484531,1.6113036730241,0.870100163485371,0.340906509664404,1.15741646340759,0,0,0,0,1.39453664789186,0,2.7881490806424,0.308033580176089,2.12922412126809,0,1.29726953372744,0.572499546967965,0,0,0.762520775695299,0.767693373934002,0,4.45484547096312,2.35484592059769,0.899362287916574,1.09814811894422,0.706874414074119,0.202182481573316,3.17020642346017,0.842516912477962,0.48763373908959,0.487426979262569,3.16950440270266,0.136499911407986,2.40389234321312,6.78048699721457,0.551365343546124,0.66343897524122,1.75380354101505,1.73632660280006,0.655894752046633,1.21746226177622,0.30982349809975,0.281695602532241,0.143411352204052,0.785992328104969,1.78335525740625,0,9.07762831779956,8.89096210991735,1.51789269506286,2.0996083214699,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,1.87549976869378,0,0,0,0,0,0,0,5.47763229679661,0,0,0,0.321176150207399,0,0,0.343505344755765,0.307240764308458,2.01308497103174,1.33479313369527,0.19538809540204,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.597743964753209,0.552567831062295,0,0,0.246169610922139,1.55519793830904,0,0,0.511572370226872,0.591860433821602,0,2.22273980289274,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.538651809526579,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.16386819786103,0,1.12990370390266,0.822251547880505,0.993573058514948,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0.951329442515298,0.418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| |||
|short_description=p@chr5:140887632..140887652,+ | |||
}} |
Latest revision as of 10:42, 30 July 2015
Short description: | p@chr5:140887632..140887652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:140887632..140887652, + |
Coexpression cluster: | C4468_Mesenchymal_Fibroblast_Synoviocyte_Hair_leiomyoma_mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 9.48e-16 | 427 |
somatic stem cell | 4.12e-15 | 433 |
stem cell | 2.73e-14 | 441 |
connective tissue cell | 4.92e-13 | 361 |
fibroblast | 6.65e-13 | 76 |
mesenchymal stem cell of adipose | 8.25e-11 | 8 |
mesenchymal cell | 7.28e-10 | 354 |
motile cell | 6.80e-08 | 386 |
vascular associated smooth muscle cell | 1.04e-07 | 32 |
hair follicle cell | 1.25e-07 | 5 |
muscle cell | 2.82e-07 | 55 |
muscle precursor cell | 2.87e-07 | 58 |
myoblast | 2.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-07 | 58 |
smooth muscle cell | 4.25e-07 | 43 |
smooth muscle myoblast | 4.25e-07 | 43 |