FFCP PHASE1:Hg19::chr5:147618080..147618098,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_ENST00000513133_5end | |association_with_transcript=-34bp_to_ENST00000513133_5end | ||
|cluster_id=chr5:147618080..147618098,+ | |||
|coexpression_cluster_id=C1583 | |||
|description=CAGE_peak_1_at_ENST00000513133_5end | |description=CAGE_peak_1_at_ENST00000513133_5end | ||
|id=chr5:147618080..147618098,+ | |id=chr5:147618080..147618098,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.51e-17!3;CL:0000861!1.51e-17!3 | |ontology_enrichment_celltype=CL:0002150!1.51e-17!3;CL:0000861!1.51e-17!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.29e-08,2;CL:0000066,9.15e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.25e-38;29 | |||
|ontology_enrichment_disease=DOID:305!2.02e-12!106;DOID:0050687!1.76e-09!143;DOID:162!2.15e-07!235;DOID:14566!3.80e-07!239 | |ontology_enrichment_disease=DOID:305!2.02e-12!106;DOID:0050687!1.76e-09!143;DOID:162!2.15e-07!235;DOID:14566!3.80e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.50e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.32e-18,106;DOID:0050687,5.04e-13,143;DOID:4362,1.50e-12,5;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.94e-52!9;UBERON:0001557!2.18e-29!19;UBERON:0008947!8.42e-17!38;UBERON:0003258!8.42e-17!38;UBERON:0000072!4.86e-16!46;UBERON:0000065!1.32e-13!53;UBERON:0000002!1.58e-09!6;UBERON:0001560!1.58e-09!6;UBERON:0001004!2.13e-09!72;UBERON:0006947!1.10e-08!3;UBERON:0004054!1.10e-08!3;UBERON:0000077!4.03e-08!130;UBERON:0000063!1.45e-07!97;UBERON:0001301!3.82e-07!1;UBERON:0001000!4.06e-07!1;UBERON:0005352!4.06e-07!1;UBERON:0004921!5.86e-07!129;UBERON:0004185!5.86e-07!129 | |ontology_enrichment_uberon=UBERON:0001737!1.94e-52!9;UBERON:0001557!2.18e-29!19;UBERON:0008947!8.42e-17!38;UBERON:0003258!8.42e-17!38;UBERON:0000072!4.86e-16!46;UBERON:0000065!1.32e-13!53;UBERON:0000002!1.58e-09!6;UBERON:0001560!1.58e-09!6;UBERON:0001004!2.13e-09!72;UBERON:0006947!1.10e-08!3;UBERON:0004054!1.10e-08!3;UBERON:0000077!4.03e-08!130;UBERON:0000063!1.45e-07!97;UBERON:0001301!3.82e-07!1;UBERON:0001000!4.06e-07!1;UBERON:0005352!4.06e-07!1;UBERON:0004921!5.86e-07!129;UBERON:0004185!5.86e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.15e-125;9!UBERON:0001557;7.15e-125;9!UBERON:0000072;7.67e-28;37!UBERON:0000065;1.57e-23;44!UBERON:0001004;2.32e-12;65!UBERON:0000002;1.30e-10;6!UBERON:0001560;1.30e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.15e-125,9;UBERON:0001557,6.82e-59,19;UBERON:0008947,3.99e-29,38;UBERON:0003258,3.99e-29,38;UBERON:0000072,2.08e-23,47;UBERON:0000065,2.84e-20,54;UBERON:0001004,1.42e-14,74;UBERON:0001041,2.89e-12,87;UBERON:0000002,1.30e-10,6;UBERON:0001560,1.30e-10,6;UBERON:0004921,1.01e-08,118;UBERON:0001007,1.19e-08,145;UBERON:0001555,1.19e-08,145;UBERON:0007026,1.19e-08,145;UBERON:0001048,8.53e-08,160;UBERON:0004119,9.69e-08,160;UBERON:0000925,9.69e-08,160;UBERON:0006595,9.69e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2391460037852,8.42923450390509,6.98931986662098,11.6911611096338,8.27941887551143,7.82993043066619,7.28089064064888,9.41863032601661,6.15595451114225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0,21.896631167317,13.1058319621887,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.19351266257817,0.584714536689484,0.574808199372465,0,0,0,0,0,0,22.879511779972,0,0,0,0,0,0,0,0,28.5189781886322,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2391460037852,8.42923450390509,6.98931986662098,11.6911611096338,8.27941887551143,7.82993043066619,7.28089064064888,9.41863032601661,6.15595451114225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0,21.896631167317,13.1058319621887,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.19351266257817,0.584714536689484,0.574808199372465,0,0,0,0,0,0,22.879511779972,0,0,0,0,0,0,0,0,28.5189781886322,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000513133 | |short_description=p1@ENST00000513133 | ||
}} | }} |
Latest revision as of 11:17, 30 July 2015
Short description: | p1@ENST00000513133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000513133_5end |
Coexpression cluster: | C1583_gall_Hep2_lung_cervical_mesothelioma_glassy_amniotic |
Association with transcript: | -34bp_to_ENST00000513133_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.29e-08 | 2 |
epithelial cell | 9.15e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.15e-125 | 9 |
upper respiratory tract | 6.82e-59 | 19 |
respiratory primordium | 3.99e-29 | 38 |
endoderm of foregut | 3.99e-29 | 38 |
segment of respiratory tract | 2.08e-23 | 47 |
respiratory tract | 2.84e-20 | 54 |
respiratory system | 1.42e-14 | 74 |
foregut | 2.89e-12 | 87 |
uterine cervix | 1.30e-10 | 6 |
neck of organ | 1.30e-10 | 6 |
subdivision of digestive tract | 1.01e-08 | 118 |
digestive system | 1.19e-08 | 145 |
digestive tract | 1.19e-08 | 145 |
primitive gut | 1.19e-08 | 145 |
primordium | 8.53e-08 | 160 |
endoderm-derived structure | 9.69e-08 | 160 |
endoderm | 9.69e-08 | 160 |
presumptive endoderm | 9.69e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.32e-18 | 106 |
cell type cancer | 5.04e-13 | 143 |
cervical cancer | 1.50e-12 | 5 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |