FFCP PHASE1:Hg19::chr5:147618164..147618186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000513133_5end | |association_with_transcript=31bp_to_ENST00000513133_5end | ||
|cluster_id=chr5:147618164..147618186,+ | |||
|coexpression_cluster_id=C1583 | |||
|description=CAGE_peak_2_at_ENST00000513133_5end | |description=CAGE_peak_2_at_ENST00000513133_5end | ||
|id=chr5:147618164..147618186,+ | |id=chr5:147618164..147618186,+ | ||
|ontology_enrichment_celltype=CL:0002150!4.97e-20!3;CL:0000861!4.97e-20!3 | |ontology_enrichment_celltype=CL:0002150!4.97e-20!3;CL:0000861!4.97e-20!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;3.56e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.56e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.45e-36;29 | |||
|ontology_enrichment_disease=DOID:305!4.53e-15!106;DOID:0050687!9.49e-12!143;DOID:14566!2.00e-10!239;DOID:162!1.29e-09!235;DOID:4960!8.69e-08!1;DOID:0070004!8.69e-08!1 | |ontology_enrichment_disease=DOID:305!4.53e-15!106;DOID:0050687!9.49e-12!143;DOID:14566!2.00e-10!239;DOID:162!1.29e-09!235;DOID:4960!8.69e-08!1;DOID:0070004!8.69e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4362;8.78e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.22e-16,106;DOID:0050687,3.51e-14,143;DOID:4362,9.26e-12,5;DOID:162,4.21e-11,235;DOID:14566,7.75e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.51e-61!9;UBERON:0001557!4.19e-28!19;UBERON:0008947!1.98e-16!38;UBERON:0003258!1.98e-16!38;UBERON:0000072!2.86e-13!46;UBERON:0000065!2.74e-11!53;UBERON:0000002!9.02e-11!6;UBERON:0001560!9.02e-11!6;UBERON:0001004!7.41e-08!72;UBERON:0001301!8.12e-08!1 | |ontology_enrichment_uberon=UBERON:0001737!7.51e-61!9;UBERON:0001557!4.19e-28!19;UBERON:0008947!1.98e-16!38;UBERON:0003258!1.98e-16!38;UBERON:0000072!2.86e-13!46;UBERON:0000065!2.74e-11!53;UBERON:0000002!9.02e-11!6;UBERON:0001560!9.02e-11!6;UBERON:0001004!7.41e-08!72;UBERON:0001301!8.12e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.05e-117;9!UBERON:0001557;2.05e-117;9!UBERON:0000072;4.19e-26;37!UBERON:0000065;4.70e-22;44!UBERON:0001004;1.40e-11;65!UBERON:0000002;5.68e-10;6!UBERON:0001560;5.68e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.57e-117,9;UBERON:0001557,2.32e-55,19;UBERON:0008947,2.62e-27,38;UBERON:0003258,2.62e-27,38;UBERON:0000072,6.41e-22,47;UBERON:0000065,5.76e-19,54;UBERON:0001004,1.36e-13,74;UBERON:0001041,2.03e-11,87;UBERON:0000002,5.94e-10,6;UBERON:0001560,5.94e-10,6;UBERON:0004921,4.44e-08,118;UBERON:0001007,5.51e-08,145;UBERON:0001555,5.51e-08,145;UBERON:0007026,5.51e-08,145;UBERON:0001048,3.53e-07,160;UBERON:0004119,3.98e-07,160;UBERON:0000925,3.98e-07,160;UBERON:0006595,3.98e-07,160 | |||
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|short_description=p2@ENST00000513133 | |short_description=p2@ENST00000513133 | ||
}} | }} |
Latest revision as of 11:17, 30 July 2015
Short description: | p2@ENST00000513133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000513133_5end |
Coexpression cluster: | C1583_gall_Hep2_lung_cervical_mesothelioma_glassy_amniotic |
Association with transcript: | 31bp_to_ENST00000513133_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.57e-117 | 9 |
upper respiratory tract | 2.32e-55 | 19 |
respiratory primordium | 2.62e-27 | 38 |
endoderm of foregut | 2.62e-27 | 38 |
segment of respiratory tract | 6.41e-22 | 47 |
respiratory tract | 5.76e-19 | 54 |
respiratory system | 1.36e-13 | 74 |
foregut | 2.03e-11 | 87 |
uterine cervix | 5.94e-10 | 6 |
neck of organ | 5.94e-10 | 6 |
subdivision of digestive tract | 4.44e-08 | 118 |
digestive system | 5.51e-08 | 145 |
digestive tract | 5.51e-08 | 145 |
primitive gut | 5.51e-08 | 145 |
primordium | 3.53e-07 | 160 |
endoderm-derived structure | 3.98e-07 | 160 |
endoderm | 3.98e-07 | 160 |
presumptive endoderm | 3.98e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.22e-16 | 106 |
cell type cancer | 3.51e-14 | 143 |
cervical cancer | 9.26e-12 | 5 |
cancer | 4.21e-11 | 235 |
disease of cellular proliferation | 7.75e-11 | 239 |