FFCP PHASE1:Hg19::chr5:159894797..159894808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-436bp_to_uc003lyl.3_5end | |association_with_transcript=-436bp_to_uc003lyl.3_5end | ||
|cluster_id=chr5:159894797..159894808,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_9_at_uc003lyl.3_5end | |description=CAGE_peak_9_at_uc003lyl.3_5end | ||
|id=chr5:159894797..159894808,+ | |id=chr5:159894797..159894808,+ | ||
|ontology_enrichment_celltype=CL:0000148!2.00e-21!10;CL:0000541!2.00e-21!10;CL:0000147!5.37e-15!14;CL:0002567!1.93e-14!3;CL:0000710!5.02e-13!20;CL:0000815!2.53e-09!2;CL:0000792!2.53e-09!2;CL:0002677!2.53e-09!2;CL:0000075!2.75e-09!27;CL:0002077!2.37e-07!33 | |ontology_enrichment_celltype=CL:0000148!2.00e-21!10;CL:0000541!2.00e-21!10;CL:0000147!5.37e-15!14;CL:0002567!1.93e-14!3;CL:0000710!5.02e-13!20;CL:0000815!2.53e-09!2;CL:0000792!2.53e-09!2;CL:0002677!2.53e-09!2;CL:0000075!2.75e-09!27;CL:0002077!2.37e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.40e-74;10!CL:0000147;3.08e-53;14!CL:0002567;2.96e-47;3!CL:0000710;3.29e-37;20!CL:0000075;1.70e-27;27!CL:0002077;3.16e-19;34!CL:0002566;8.18e-17;1!CL:0002591;1.78e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.14e-75,10;CL:0000541,8.14e-75,10;CL:0000147,2.09e-53,14;CL:0002567,2.96e-47,3;CL:0000710,2.51e-37,20;CL:0000075,1.40e-27,27;CL:0000333,2.44e-22,41;CL:0002077,7.74e-22,34;CL:0002566,8.86e-17,1;CL:0002591,2.25e-16,1;CL:0000133,1.40e-15,59;CL:0000221,9.81e-13,72 | |||
|ontology_enrichment_development_v019=CL:0000133;5.33e-09;59!CL:0000221;5.69e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!1.97e-09!2 | |ontology_enrichment_disease=DOID:1909!1.97e-09!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;6.67e-09;2!UBERON:0002012;6.67e-09;2!UBERON:0008886;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.49e-09,2;UBERON:0007497,7.49e-09,2;UBERON:0003643,7.49e-09,2;UBERON:0003504,7.49e-09,2;UBERON:0003469,7.49e-09,2;UBERON:0003496,7.49e-09,2;UBERON:0002012,7.49e-09,2;UBERON:0008886,7.49e-09,2;UBERON:0007303,7.49e-09,2;UBERON:0002061,7.49e-09,2;UBERON:0005432,7.49e-09,2;UBERON:0004363,7.49e-09,2 | |||
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| ||
|short_description=p9@uc003lyl.3 | |short_description=p9@uc003lyl.3 | ||
}} | }} |
Latest revision as of 12:28, 30 July 2015
Short description: | p9@uc003lyl.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_uc003lyl.3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -436bp_to_uc003lyl.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.14e-75 | 10 |
melanoblast | 8.14e-75 | 10 |
pigment cell | 2.09e-53 | 14 |
light melanocyte | 2.96e-47 | 3 |
neurecto-epithelial cell | 2.51e-37 | 20 |
columnar/cuboidal epithelial cell | 1.40e-27 | 27 |
migratory neural crest cell | 2.44e-22 | 41 |
ecto-epithelial cell | 7.74e-22 | 34 |
dark melanocyte | 8.86e-17 | 1 |
smooth muscle cell of the pulmonary artery | 2.25e-16 | 1 |
neurectodermal cell | 1.40e-15 | 59 |
ectodermal cell | 9.81e-13 | 72 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.49e-09 | 2 |
developing epithelial placode | 7.49e-09 | 2 |
respiratory system arterial blood vessel | 7.49e-09 | 2 |
respiratory system blood vessel | 7.49e-09 | 2 |
respiratory system artery | 7.49e-09 | 2 |
head blood vessel | 7.49e-09 | 2 |
pulmonary artery | 7.49e-09 | 2 |
pulmonary vascular system | 7.49e-09 | 2 |
pharyngeal vasculature | 7.49e-09 | 2 |
truncus arteriosus | 7.49e-09 | 2 |
aortic sac | 7.49e-09 | 2 |
pharyngeal arch artery | 7.49e-09 | 2 |