FFCP PHASE1:Hg19::chr5:88036490..88036495,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:88036490..88036495,- | |||
|coexpression_cluster_id=C1165 | |||
|description=CAGE_peak_at_chr5:88036490..88036495,- | |description=CAGE_peak_at_chr5:88036490..88036495,- | ||
|id=chr5:88036490..88036495,- | |id=chr5:88036490..88036495,- | ||
|ontology_enrichment_celltype=CL:0000945!1.19e-18!24;CL:0000826!1.19e-18!24;CL:0000236!1.95e-12!14;CL:0000037!4.53e-08!172;CL:0000566!4.53e-08!172;CL:0002032!1.67e-07!165;CL:0000837!1.67e-07!165;CL:0000988!8.17e-07!182 | |ontology_enrichment_celltype=CL:0000945!1.19e-18!24;CL:0000826!1.19e-18!24;CL:0000236!1.95e-12!14;CL:0000037!4.53e-08!172;CL:0000566!4.53e-08!172;CL:0002032!1.67e-07!165;CL:0000837!1.67e-07!165;CL:0000988!8.17e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.31e-25;24!CL:0000236;1.68e-20;13!CL:0000542;1.69e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.96e-25,24;CL:0000826,1.96e-25,24;CL:0000236,3.13e-23,14;CL:0000542,1.08e-11,53;CL:0000051,1.08e-11,53;CL:0000838,1.35e-10,52 | |||
|ontology_enrichment_development_v019=CL:0000051;1.69e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!5.96e-11!31;DOID:2531!8.05e-11!51;DOID:0060083!8.05e-11!51;DOID:1240!7.54e-10!39 | |ontology_enrichment_disease=DOID:8692!5.96e-11!31;DOID:2531!8.05e-11!51;DOID:0060083!8.05e-11!51;DOID:1240!7.54e-10!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-35!115;UBERON:0001049!5.04e-20!57;UBERON:0005068!5.04e-20!57;UBERON:0006241!5.04e-20!57;UBERON:0007135!5.04e-20!57;UBERON:0003080!8.06e-20!42;UBERON:0002780!2.63e-19!41;UBERON:0001890!2.63e-19!41;UBERON:0006240!2.63e-19!41;UBERON:0002619!3.19e-17!22;UBERON:0001893!6.83e-17!34;UBERON:0002020!1.02e-16!34;UBERON:0003528!1.02e-16!34;UBERON:0002616!1.60e-16!59;UBERON:0002791!2.65e-16!33;UBERON:0001869!5.53e-16!32;UBERON:0001950!7.97e-16!20;UBERON:0000956!2.57e-15!25;UBERON:0000203!2.57e-15!25;UBERON:0001017!7.41e-15!82;UBERON:0000955!7.11e-14!69;UBERON:0006238!7.11e-14!69;UBERON:0005743!8.02e-14!86;UBERON:0002346!1.13e-13!90;UBERON:0003075!4.00e-13!86;UBERON:0007284!4.00e-13!86;UBERON:0000073!2.25e-12!94;UBERON:0001016!2.25e-12!94;UBERON:0003056!9.85e-12!61;UBERON:0001871!1.98e-07!7;UBERON:0000479!2.21e-07!787;UBERON:0000153!8.56e-07!129;UBERON:0007811!8.56e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!2.35e-35!115;UBERON:0001049!5.04e-20!57;UBERON:0005068!5.04e-20!57;UBERON:0006241!5.04e-20!57;UBERON:0007135!5.04e-20!57;UBERON:0003080!8.06e-20!42;UBERON:0002780!2.63e-19!41;UBERON:0001890!2.63e-19!41;UBERON:0006240!2.63e-19!41;UBERON:0002619!3.19e-17!22;UBERON:0001893!6.83e-17!34;UBERON:0002020!1.02e-16!34;UBERON:0003528!1.02e-16!34;UBERON:0002616!1.60e-16!59;UBERON:0002791!2.65e-16!33;UBERON:0001869!5.53e-16!32;UBERON:0001950!7.97e-16!20;UBERON:0000956!2.57e-15!25;UBERON:0000203!2.57e-15!25;UBERON:0001017!7.41e-15!82;UBERON:0000955!7.11e-14!69;UBERON:0006238!7.11e-14!69;UBERON:0005743!8.02e-14!86;UBERON:0002346!1.13e-13!90;UBERON:0003075!4.00e-13!86;UBERON:0007284!4.00e-13!86;UBERON:0000073!2.25e-12!94;UBERON:0001016!2.25e-12!94;UBERON:0003056!9.85e-12!61;UBERON:0001871!1.98e-07!7;UBERON:0000479!2.21e-07!787;UBERON:0000153!8.56e-07!129;UBERON:0007811!8.56e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.45e-26;22!UBERON:0001950;4.41e-23;20!UBERON:0000956;6.16e-23;25!UBERON:0000203;6.16e-23;25!UBERON:0002791;1.90e-17;32!UBERON:0001869;1.04e-15;32!UBERON:0003528;8.45e-15;34!UBERON:0002020;8.45e-15;34!UBERON:0002780;1.23e-14;41!UBERON:0001890;1.23e-14;41!UBERON:0001893;1.93e-14;34!UBERON:0001871;6.59e-12;6!UBERON:0002021;1.36e-08;5!UBERON:0000073;2.33e-08;53!UBERON:0002616;2.33e-08;53!UBERON:0001870;8.18e-08;3!UBERON:0000349;3.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.77e-27,22;UBERON:0001950,2.45e-23,20;UBERON:0000956,3.98e-23,25;UBERON:0000203,3.98e-23,25;UBERON:0002780,1.49e-19,41;UBERON:0001890,1.49e-19,41;UBERON:0003080,1.49e-19,41;UBERON:0006240,1.49e-19,41;UBERON:0002791,2.38e-19,32;UBERON:0003528,5.91e-18,34;UBERON:0002020,5.91e-18,34;UBERON:0001893,5.91e-18,34;UBERON:0001869,3.35e-17,32;UBERON:0001049,3.05e-14,56;UBERON:0005068,3.05e-14,56;UBERON:0006241,3.05e-14,56;UBERON:0007135,3.05e-14,56;UBERON:0000073,6.51e-14,53;UBERON:0002616,6.51e-14,53;UBERON:0001871,4.80e-12,6;UBERON:0007023,1.39e-11,114;UBERON:0003056,2.13e-11,61;UBERON:0000955,1.27e-10,68;UBERON:0006238,1.27e-10,68;UBERON:0003075,6.50e-10,82;UBERON:0007284,6.50e-10,82;UBERON:0002346,3.50e-09,86;UBERON:0001017,5.62e-09,81;UBERON:0002021,1.11e-08,5;UBERON:0001870,6.24e-08,3;UBERON:0001016,1.49e-07,89;UBERON:0000349,3.07e-07,5;UBERON:0010314,4.64e-07,132 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.376627918784408,1.68109492645493,1.55991119954897,1.65292640758726,0,0.383829398097213,0,0,0,0,0.774672005803016,2.70121541726101,0.587200878669695,0,0,0,0.895661896959697,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,1.27867425159808,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,1.21079900526674,0,0,0.422510572623884,0,0.628975936525128,0.112328631146495,0.300353785683013,0.32145117339416,0.285012743741249,0.59675003159727,0.365328307529268,1.75996244461323,6.00752472388345,3.55803701545422,6.82768356106412,2.80277190925209,3.4485146397269,5.94940385506376,1.90810750907073,1.1384259382189,1.76171156811282,1.91136614062614,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0,1.16089646769304,1.34717623575702,0.563057402416611,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,1.14734648299525,0,0,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.824328093181778,3.20493126864202,2.14524699793529,0,0,0,0.096670718292122,1.07834031980251,0.460511024178389,0.413509717453592,0,0.580066775656914,0.681813019328807,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,1.13929437434833,0.952927101831156,1.64544909234478,0,0.540031437238115,0.79312517629427,0,0,0,2.41544127663434,0.577076851905779,0,0,0.399158742865633,0.383010740264733,0.211673582723883,0.973865820823666,0,1.36940807419915,0,0,2.53937666702405,0,0.201799707191048,3.40676990152261,0.343505344755765,0.614481528616916,0.223676107892416,0.500547425135725,0,0.556812347790485,3.69262196843137,0.811367035427949,0.99921590399346,2.81974010175699,0,0.439524537815682,0,0,0,0,0,0,1.9882952955326,1.26602474769461,0.111308705022906,0,0,0.796991953004279,1.93398740871803,0,0,0.984678443688556,0,0,0,3.06943422136123,0.493217028184668,0,0,0,0.74214478529481,1.99613798001194,0,0.0874599999961957,0.724999575434793,0,0,0.236387681767936,0,0,0.173624994933292,0,0.723578631752448,0,0.774054819518572,0,0.219385397153973,0,0,1.15425387755696,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,1.99454018280188,0.451191321234361,0.392125068635479,1.1747511088309,0.569261198172555,1.58936578980379,0,0,0,0,0.995261931078505,0.707660516026713,0.611030144933625,0.296521128680622,0,0,0.269604531922708,1.60515529459758,0.234264445725339,0.729819156862664,0,0.242780379534093,0,2.41981432097328,7.65181904076225,0.884612114798832,0.150323419414493,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,0.451961481561065,0,0,2.089256266544,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0.429765441419957,2.62887354279315,1.11712960508902,2.52076466412852,0,0.399358000997982,0,0.223171457441873,1.20930250476107,0,0,0,0,0,0,0.254019996197353,1.59045937961861,1.22583065500418,0,0,0,0,0,0.728994679896296,0,0.157611414598396,0,0.211200673038813,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,2.21649806023215,0,0,0.146552233678082,0,0.517131825446202,0.26446520348538,0,0,0.961086713109252,2.51526888159466,2.07119527673598,0.496166021811951,0.395223263795889,0.974340787047167,0,0,0,0,0,0,1.77213635993397,1.70836770862748,2.754200475543,0.573409195690071,0.887432412294818,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,1.20008329398946,0.343395705182793,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,3.17994403148981,0,0,0,0,0,0,0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|short_description=p@chr5:88036490..88036495,- | |short_description=p@chr5:88036490..88036495,- | ||
}} | }} |
Latest revision as of 17:08, 30 July 2015
Short description: | p@chr5:88036490..88036495, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:88036490..88036495, - |
Coexpression cluster: | C1165_occipital_parietal_duodenum_temporal_brain_medial_frontal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.96e-25 | 24 |
pro-B cell | 1.96e-25 | 24 |
B cell | 3.13e-23 | 14 |
lymphocyte | 1.08e-11 | 53 |
common lymphoid progenitor | 1.08e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.35e-10 | 52 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 8.77e-27 | 22 |
neocortex | 2.45e-23 | 20 |
cerebral cortex | 3.98e-23 | 25 |
pallium | 3.98e-23 | 25 |
regional part of forebrain | 1.49e-19 | 41 |
forebrain | 1.49e-19 | 41 |
anterior neural tube | 1.49e-19 | 41 |
future forebrain | 1.49e-19 | 41 |
regional part of telencephalon | 2.38e-19 | 32 |
brain grey matter | 5.91e-18 | 34 |
gray matter | 5.91e-18 | 34 |
telencephalon | 5.91e-18 | 34 |
cerebral hemisphere | 3.35e-17 | 32 |
neural tube | 3.05e-14 | 56 |
neural rod | 3.05e-14 | 56 |
future spinal cord | 3.05e-14 | 56 |
neural keel | 3.05e-14 | 56 |
regional part of nervous system | 6.51e-14 | 53 |
regional part of brain | 6.51e-14 | 53 |
temporal lobe | 4.80e-12 | 6 |
adult organism | 1.39e-11 | 114 |
pre-chordal neural plate | 2.13e-11 | 61 |
brain | 1.27e-10 | 68 |
future brain | 1.27e-10 | 68 |
neural plate | 6.50e-10 | 82 |
presumptive neural plate | 6.50e-10 | 82 |
neurectoderm | 3.50e-09 | 86 |
central nervous system | 5.62e-09 | 81 |
occipital lobe | 1.11e-08 | 5 |
frontal cortex | 6.24e-08 | 3 |
nervous system | 1.49e-07 | 89 |
limbic system | 3.07e-07 | 5 |
structure with developmental contribution from neural crest | 4.64e-07 | 132 |