FFCP PHASE1:Hg19::chr5:92919596..92919609,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:92919596..92919609,+ | |||
|description=CAGE_peak_at_chr5:92919596..92919609,+ | |description=CAGE_peak_at_chr5:92919596..92919609,+ | ||
|id=chr5:92919596..92919609,+ | |id=chr5:92919596..92919609,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000487;2.84e-22;2!CL:0000511;8.17e-12;1!CL:0002625;8.17e-12;1!CL:0000216;8.17e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,1.20e-22,2;CL:0000511,5.62e-12,1;CL:0002625,5.62e-12,1;CL:0000216,5.62e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.17e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!3.05e-13!86;UBERON:0007284!3.05e-13!86;UBERON:0002346!7.51e-13!90;UBERON:0001049!1.97e-12!57;UBERON:0005068!1.97e-12!57;UBERON:0006241!1.97e-12!57;UBERON:0007135!1.97e-12!57;UBERON:0005743!7.12e-12!86;UBERON:0001017!2.64e-11!82;UBERON:0000073!4.82e-11!94;UBERON:0001016!4.82e-11!94;UBERON:0000477!1.10e-10!286;UBERON:0007023!1.64e-10!115;UBERON:0000119!4.37e-10!312;UBERON:0002616!7.26e-10!59;UBERON:0000483!1.09e-09!309;UBERON:0003056!1.16e-09!61;UBERON:0000475!1.30e-09!365;UBERON:0001893!2.08e-09!34;UBERON:0001869!2.31e-09!32;UBERON:0002020!2.49e-09!34;UBERON:0003528!2.49e-09!34;UBERON:0000955!4.72e-09!69;UBERON:0006238!4.72e-09!69;UBERON:0002791!7.60e-09!33;UBERON:0004111!1.11e-08!241;UBERON:0002780!1.65e-08!41;UBERON:0001890!1.65e-08!41;UBERON:0006240!1.65e-08!41;UBERON:0003080!3.70e-08!42;UBERON:0002619!7.01e-08!22;UBERON:0001950!1.34e-07!20;UBERON:0000956!2.14e-07!25;UBERON:0000203!2.14e-07!25;UBERON:0000033!2.16e-07!123;UBERON:0000025!3.47e-07!194;UBERON:0000481!6.28e-07!347;UBERON:0003937!8.78e-07!12;UBERON:0005399!8.78e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;5.36e-12;22!UBERON:0000079;5.36e-12;22!UBERON:0001136;8.17e-12;1!UBERON:0000941;8.17e-12;1!UBERON:0001301;8.17e-12;1!UBERON:0001343;8.17e-12;1!UBERON:0001785;8.17e-12;1!UBERON:0002464;8.17e-12;1!UBERON:0004904;8.17e-12;1!UBERON:0001021;8.17e-12;1!UBERON:0004910;8.17e-12;1!UBERON:0004813;8.17e-12;1!UBERON:0005904;2.02e-11;4!UBERON:0002367;2.24e-09;11!UBERON:0010147;2.24e-09;11!UBERON:0003937;1.23e-08;12!UBERON:0005399;1.23e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,4.35e-12,22;UBERON:0000079,4.35e-12,22;UBERON:0001136,5.62e-12,1;UBERON:0001343,5.62e-12,1;UBERON:0004910,5.62e-12,1;UBERON:0005154,5.62e-12,1;UBERON:0005295,5.62e-12,1;UBERON:0004813,5.62e-12,1;UBERON:0005297,5.62e-12,1;UBERON:0005294,5.62e-12,1;UBERON:0010141,5.62e-12,1;UBERON:0005891,5.62e-12,1;UBERON:0004122,9.08e-12,15;UBERON:0000941,9.61e-12,1;UBERON:0001785,9.61e-12,1;UBERON:0002464,9.61e-12,1;UBERON:0004904,9.61e-12,1;UBERON:0001021,9.61e-12,1;UBERON:0003902,9.61e-12,1;UBERON:0005425,9.61e-12,1;UBERON:0001301,1.07e-11,1;UBERON:0005904,1.92e-11,4;UBERON:0002367,1.79e-09,11;UBERON:0010147,1.79e-09,11;UBERON:0009846,1.79e-09,11;UBERON:0003353,1.79e-09,11;UBERON:0004902,1.79e-09,11;UBERON:0003820,1.79e-09,11;UBERON:0009847,1.79e-09,11;UBERON:0003064,1.80e-09,28;UBERON:0003937,1.00e-08,12;UBERON:0005399,1.00e-08,12;UBERON:0000162,1.51e-07,14;UBERON:0001353,1.51e-07,14;UBERON:0000163,1.51e-07,14;UBERON:0006866,1.51e-07,14;UBERON:0000164,1.51e-07,14;UBERON:0000931,1.51e-07,14 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.986680828671798,0,1.78784437770915,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.246242116153576,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,1.37559020970034,0,0,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0.516628905878827,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.621966330092223,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0,0,0,0.57191197463259,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.508189248444927,0,1.54657762555539,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0.391602314925481,1.37257369524342,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.482561763430822,0,0,0.355123450626254,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0.364182336013434,5.63834984325524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,2.45699840534374,1.83827061539827,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.284136146806413,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,0.886642856860642,0,0,0,0.461701551022782,0.113942055847001,0,0.0897576444097721,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,1.45668227720456,0,0,1.53036380815245,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0.693373365065693,0,0,0,1.39781334593624,0,0,0.0730893170861856,0.246346371159628,0.0969890164884194,0.176512253383001,0.225980740780532,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.295282444544246,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0.339936274560377,0.293104467356165,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0.828478110694391,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0.1251909307065,0,0.443716206147409,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.358177682162975,0,0.219284049578707,0.706756583783524,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0.504143392443436,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.676892955143315,0,0,0,0.163771917510097,0,0.202612753855184,0,0,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.197318320688547,0,0.444925607568277,0.078493092850514,0.157115589916002,0,0,0,0,0.428859265059938,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.356760272332706,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0.244482888365733,0,0.665756774185513,0.402547587182052,0 | |phase1_expression=0.908391896352783,0.428201047781966,0.986680828671798,0,1.78784437770915,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.246242116153576,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,1.37559020970034,0,0,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0.516628905878827,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.621966330092223,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0,0,0,0.57191197463259,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.508189248444927,0,1.54657762555539,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0.391602314925481,1.37257369524342,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.482561763430822,0,0,0.355123450626254,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0.364182336013434,5.63834984325524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,2.45699840534374,1.83827061539827,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.284136146806413,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,0.886642856860642,0,0,0,0.461701551022782,0.113942055847001,0,0.0897576444097721,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,1.45668227720456,0,0,1.53036380815245,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0.693373365065693,0,0,0,1.39781334593624,0,0,0.0730893170861856,0.246346371159628,0.0969890164884194,0.176512253383001,0.225980740780532,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.295282444544246,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0.339936274560377,0.293104467356165,0,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0.828478110694391,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0.1251909307065,0,0.443716206147409,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.358177682162975,0,0.219284049578707,0.706756583783524,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0.504143392443436,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.676892955143315,0,0,0,0.163771917510097,0,0.202612753855184,0,0,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.197318320688547,0,0.444925607568277,0.078493092850514,0.157115589916002,0,0,0,0,0.428859265059938,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.356760272332706,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0.244482888365733,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p@chr5:92919596..92919609,+ | |short_description=p@chr5:92919596..92919609,+ | ||
}} | }} |
Latest revision as of 17:19, 30 July 2015
Short description: | p@chr5:92919596..92919609, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:92919596..92919609, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 1.20e-22 | 2 |
androgen binding protein secreting cell | 5.62e-12 | 1 |
seminiferous tubule epithelial cell | 5.62e-12 | 1 |
Sertoli cell | 5.62e-12 | 1 |