FFCP PHASE1:Hg19::chr6:25004775..25004790,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:25004775..25004790,- | |||
|coexpression_cluster_id=C458 | |coexpression_cluster_id=C458 | ||
|description=CAGE_peak_at_chr6:25004775..25004790,- | |description=CAGE_peak_at_chr6:25004775..25004790,- | ||
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|ontology_enrichment_celltype=CL:0002623!5.99e-13!3;CL:0002602!3.02e-08!2;CL:0000622!6.53e-08!5 | |ontology_enrichment_celltype=CL:0002623!5.99e-13!3;CL:0002602!3.02e-08!2;CL:0000622!6.53e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002623;5.00e-67;3!CL:0000622;1.30e-40;5!CL:0000154;5.37e-34;6!CL:0000150;5.99e-23;9!CL:0002569;1.26e-15;6!CL:0002251;1.01e-10;20 | |ontology_enrichment_celltype_v019=CL:0002623;5.00e-67;3!CL:0000622;1.30e-40;5!CL:0000154;5.37e-34;6!CL:0000150;5.99e-23;9!CL:0002569;1.26e-15;6!CL:0002251;1.01e-10;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.01e-67,3;CL:0000622,1.30e-40,5;CL:0000154,5.37e-34,6;CL:0000150,5.99e-23,9;CL:0002569,1.13e-15,6;CL:0002251,1.01e-10,20 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.06e-12;2 | |ontology_enrichment_development_v019=UBERON:0007297;3.06e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001044;5.37e-34;6!UBERON:0003293;5.37e-34;6!UBERON:0003294;5.37e-34;6!UBERON:0010047;5.37e-34;6!UBERON:0003408;5.37e-34;6!UBERON:0000167;5.37e-34;6!UBERON:0001301;4.59e-23;1!UBERON:0003422;1.26e-15;6!UBERON:0001041;5.02e-15;14!UBERON:0003104;1.54e-13;7!UBERON:0009142;1.54e-13;7!UBERON:0000007;2.32e-12;2!UBERON:0000161;2.98e-11;19!UBERON:0000166;2.98e-11;19!UBERON:0002331;9.03e-10;10!UBERON:0001896;1.35e-08;3!UBERON:0006947;1.35e-08;3!UBERON:0005290;1.35e-08;3!UBERON:0004054;1.35e-08;3!UBERON:0000165;7.83e-08;28!UBERON:0002365;2.39e-07;31!UBERON:0002330;2.39e-07;31!UBERON:0003296;8.14e-07;4!UBERON:0010133;8.14e-07;4!UBERON:0005904;9.36e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001044;5.37e-34;6!UBERON:0003293;5.37e-34;6!UBERON:0003294;5.37e-34;6!UBERON:0010047;5.37e-34;6!UBERON:0003408;5.37e-34;6!UBERON:0000167;5.37e-34;6!UBERON:0001301;4.59e-23;1!UBERON:0003422;1.26e-15;6!UBERON:0001041;5.02e-15;14!UBERON:0003104;1.54e-13;7!UBERON:0009142;1.54e-13;7!UBERON:0000007;2.32e-12;2!UBERON:0000161;2.98e-11;19!UBERON:0000166;2.98e-11;19!UBERON:0002331;9.03e-10;10!UBERON:0001896;1.35e-08;3!UBERON:0006947;1.35e-08;3!UBERON:0005290;1.35e-08;3!UBERON:0004054;1.35e-08;3!UBERON:0000165;7.83e-08;28!UBERON:0002365;2.39e-07;31!UBERON:0002330;2.39e-07;31!UBERON:0003296;8.14e-07;4!UBERON:0010133;8.14e-07;4!UBERON:0005904;9.36e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.37e-34,6;UBERON:0003293,5.37e-34,6;UBERON:0003294,5.37e-34,6;UBERON:0010047,5.37e-34,6;UBERON:0000167,5.37e-34,6;UBERON:0001301,6.40e-23,1;UBERON:0003408,9.82e-21,10;UBERON:0003422,1.13e-15,6;UBERON:0000007,2.32e-12,2;UBERON:0000166,8.34e-10,22;UBERON:0002331,8.46e-10,10;UBERON:0000358,8.46e-10,10;UBERON:0000307,8.46e-10,10;UBERON:0000091,8.46e-10,10;UBERON:0000087,8.46e-10,10;UBERON:0007010,8.46e-10,10;UBERON:0007806,8.46e-10,10;UBERON:0008780,8.46e-10,10;UBERON:0005728,8.46e-10,10;UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3;UBERON:0006947,1.51e-08,3;UBERON:0004054,1.51e-08,3;UBERON:0000165,1.39e-07,29;UBERON:0000930,1.39e-07,29;UBERON:0002365,3.95e-07,31;UBERON:0002330,3.95e-07,31;UBERON:0003296,8.14e-07,4;UBERON:0010133,8.14e-07,4 | |||
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| ||
|short_description=p@chr6:25004775..25004790,- | |short_description=p@chr6:25004775..25004790,- | ||
}} | }} |
Latest revision as of 22:50, 30 July 2015
Short description: | p@chr6:25004775..25004790, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:25004775..25004790, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.01e-67 | 3 |
acinar cell | 1.30e-40 | 5 |
protein secreting cell | 5.37e-34 | 6 |
glandular epithelial cell | 5.99e-23 | 9 |
mesenchymal stem cell of umbilical cord | 1.13e-15 | 6 |
epithelial cell of alimentary canal | 1.01e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 5.37e-34 | 6 |
gland of oral region | 5.37e-34 | 6 |
gland of foregut | 5.37e-34 | 6 |
oral gland | 5.37e-34 | 6 |
oral cavity | 5.37e-34 | 6 |
epididymis | 6.40e-23 | 1 |
gland of gut | 9.82e-21 | 10 |
mesenchyme of umbilical cord | 1.13e-15 | 6 |
pituitary gland | 2.32e-12 | 2 |
oral opening | 8.34e-10 | 22 |
umbilical cord | 8.46e-10 | 10 |
blastocyst | 8.46e-10 | 10 |
blastula | 8.46e-10 | 10 |
bilaminar disc | 8.46e-10 | 10 |
inner cell mass | 8.46e-10 | 10 |
cleaving embryo | 8.46e-10 | 10 |
connecting stalk | 8.46e-10 | 10 |
inner cell mass derived epiblast | 8.46e-10 | 10 |
extraembryonic mesoderm | 8.46e-10 | 10 |
medulla oblongata | 1.40e-08 | 3 |
myelencephalon | 1.40e-08 | 3 |
future myelencephalon | 1.40e-08 | 3 |
male genital duct | 1.51e-08 | 3 |
internal male genitalia | 1.51e-08 | 3 |
mouth | 1.39e-07 | 29 |
stomodeum | 1.39e-07 | 29 |
exocrine gland | 3.95e-07 | 31 |
exocrine system | 3.95e-07 | 31 |
gland of diencephalon | 8.14e-07 | 4 |
neuroendocrine gland | 8.14e-07 | 4 |