FFCP PHASE1:Hg19::chr6:25004888..25004899,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:25004888..25004899,- | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_at_chr6:25004888..25004899,- | |description=CAGE_peak_at_chr6:25004888..25004899,- | ||
|id=chr6:25004888..25004899,- | |id=chr6:25004888..25004899,- | ||
|ontology_enrichment_celltype=CL:0002623!2.32e-23!3;CL:0002602!2.59e-15!2;CL:0000622!3.02e-14!5;CL:0000154!5.88e-12!6;CL:0000150!4.01e-08!9 | |ontology_enrichment_celltype=CL:0002623!2.32e-23!3;CL:0002602!2.59e-15!2;CL:0000622!3.02e-14!5;CL:0000154!5.88e-12!6;CL:0000150!4.01e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.27e-147;3!CL:0000622;6.64e-89;5!CL:0000154;2.58e-74;6!CL:0000150;5.60e-50;9!CL:0002251;3.95e-23;20!CL:0000151;3.77e-14;36!CL:0002076;6.22e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-147,3;CL:0000622,6.64e-89,5;CL:0000154,2.58e-74,6;CL:0000150,5.60e-50,9;CL:0002251,3.95e-23,20;CL:0000151,2.66e-13,36;CL:0002076,1.56e-11,42;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005174!2.27e-23!5;UBERON:0001137!2.27e-23!5;UBERON:0007023!1.19e-16!115;UBERON:0009568!2.59e-15!2;UBERON:0002216!2.59e-15!2;UBERON:0002209!2.59e-15!2;UBERON:0002213!2.59e-15!2;UBERON:0004267!2.59e-15!2;UBERON:0006444!2.59e-15!2;UBERON:0001995!2.59e-15!2;UBERON:0004715!2.59e-15!2;UBERON:0001468!2.59e-15!2;UBERON:0001130!2.59e-15!2;UBERON:0001066!2.59e-15!2;UBERON:0001049!5.86e-13!57;UBERON:0005068!5.86e-13!57;UBERON:0006241!5.86e-13!57;UBERON:0007135!5.86e-13!57;UBERON:0001044!5.88e-12!6;UBERON:0003293!5.88e-12!6;UBERON:0003294!5.88e-12!6;UBERON:0010047!5.88e-12!6;UBERON:0000167!5.88e-12!6;UBERON:0002240!1.00e-10!3;UBERON:0002418!1.62e-10!3;UBERON:0004755!1.62e-10!3;UBERON:0001017!4.31e-10!82;UBERON:0001894!7.97e-10!7;UBERON:0006222!7.97e-10!7;UBERON:0005743!1.55e-09!86;UBERON:0000989!8.78e-09!1;UBERON:0008811!8.78e-09!1;UBERON:0006258!8.78e-09!1;UBERON:0005876!8.78e-09!1;UBERON:0004874!8.78e-09!1;UBERON:0000073!1.88e-08!94;UBERON:0001016!1.88e-08!94;UBERON:0006834!2.64e-08!1;UBERON:0003296!2.65e-08!4;UBERON:0010133!2.65e-08!4;UBERON:0002616!3.22e-08!59;UBERON:0002581!3.79e-08!1;UBERON:0003075!5.24e-08!86;UBERON:0007284!5.24e-08!86;UBERON:0003076!8.30e-08!15;UBERON:0003057!8.30e-08!15;UBERON:0002346!1.42e-07!90;UBERON:0002780!1.49e-07!41;UBERON:0001890!1.49e-07!41;UBERON:0006240!1.49e-07!41;UBERON:0003080!2.33e-07!42;UBERON:0003408!2.36e-07!10;UBERON:0000955!9.80e-07!69;UBERON:0006238!9.80e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.58e-74;6!UBERON:0003293;2.58e-74;6!UBERON:0003294;2.58e-74;6!UBERON:0010047;2.58e-74;6!UBERON:0003408;2.58e-74;6!UBERON:0000167;2.58e-74;6!UBERON:0001041;1.46e-32;14!UBERON:0001905;9.18e-26;2!UBERON:0002757;9.18e-26;2!UBERON:0010134;9.18e-26;2!UBERON:0005408;9.18e-26;2!UBERON:0001899;9.18e-26;2!UBERON:0000161;2.73e-24;19!UBERON:0000166;2.73e-24;19!UBERON:0000165;8.05e-17;28!UBERON:0002365;9.12e-16;31!UBERON:0002330;9.12e-16;31!UBERON:0003296;1.29e-13;4!UBERON:0010133;1.29e-13;4!UBERON:0002784;1.29e-13;4!UBERON:0004921;1.58e-12;33!UBERON:0001894;2.35e-08;7!UBERON:0002530;8.15e-08;57!UBERON:0007811;2.39e-07;52!UBERON:0000033;2.40e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0003408,4.18e-45,10;UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0000166,3.99e-21,22;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002530,2.92e-14,59;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0000161,2.66e-13,36;UBERON:0001444,5.14e-10,49;UBERON:0000033,7.15e-09,56;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0002553,3.25e-08,61;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62;UBERON:0001004,6.51e-07,74 | |||
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|short_description=p@chr6:25004888..25004899,- | |short_description=p@chr6:25004888..25004899,- | ||
}} | }} |
Latest revision as of 22:50, 30 July 2015
Short description: | p@chr6:25004888..25004899, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:25004888..25004899, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.27e-147 | 3 |
acinar cell | 6.64e-89 | 5 |
protein secreting cell | 2.58e-74 | 6 |
glandular epithelial cell | 5.60e-50 | 9 |
epithelial cell of alimentary canal | 3.95e-23 | 20 |
secretory cell | 2.66e-13 | 36 |
endo-epithelial cell | 1.56e-11 | 42 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.58e-74 | 6 |
gland of oral region | 2.58e-74 | 6 |
gland of foregut | 2.58e-74 | 6 |
oral gland | 2.58e-74 | 6 |
oral cavity | 2.58e-74 | 6 |
gland of gut | 4.18e-45 | 10 |
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
oral opening | 3.99e-21 | 22 |
mouth | 2.82e-16 | 29 |
stomodeum | 2.82e-16 | 29 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
gland | 2.92e-14 | 59 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
orifice | 2.66e-13 | 36 |
subdivision of head | 5.14e-10 | 49 |
head | 7.15e-09 | 56 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
anatomical cavity | 3.25e-08 | 61 |
anterior region of body | 4.28e-08 | 62 |
craniocervical region | 4.28e-08 | 62 |
respiratory system | 6.51e-07 | 74 |