FFCP PHASE1:Hg19::chr6:3209188..3209193,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:3209188..3209193,- | |||
|coexpression_cluster_id=C122 | |coexpression_cluster_id=C122 | ||
|description=CAGE_peak_at_chr6:3209188..3209193,- | |description=CAGE_peak_at_chr6:3209188..3209193,- | ||
|id=chr6:3209188..3209193,- | |id=chr6:3209188..3209193,- | ||
|ontology_enrichment_celltype=CL:0000243!4.82e-07!15;CL:0000125!4.82e-07!15;CL:0000030!4.82e-07!15;CL:0000339!4.82e-07!15 | |ontology_enrichment_celltype=CL:0000243!4.82e-07!15;CL:0000125!4.82e-07!15;CL:0000030!4.82e-07!15;CL:0000339!4.82e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000307;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.35e-07,3;CL:0000069,3.35e-07,3;CL:0000307,3.35e-07,3;CL:0000377,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.60e-10;2!UBERON:0010056;2.60e-10;2!UBERON:0006238;1.51e-07;10!CL:0000377;2.71e-07;3 | |||
|ontology_enrichment_disease=DOID:305!4.14e-12!106;DOID:14566!9.70e-11!239;DOID:0050687!1.45e-10!143;DOID:162!1.63e-09!235;DOID:1749!3.89e-09!14;DOID:4231!9.57e-09!2;DOID:1907!9.57e-09!2;DOID:4074!1.94e-08!2;DOID:4905!1.94e-08!2;DOID:3498!1.94e-08!2;DOID:3093!1.59e-07!11 | |ontology_enrichment_disease=DOID:305!4.14e-12!106;DOID:14566!9.70e-11!239;DOID:0050687!1.45e-10!143;DOID:162!1.63e-09!235;DOID:1749!3.89e-09!14;DOID:4231!9.57e-09!2;DOID:1907!9.57e-09!2;DOID:4074!1.94e-08!2;DOID:4905!1.94e-08!2;DOID:3498!1.94e-08!2;DOID:3093!1.59e-07!11 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.51e-12;14!DOID:4231;2.60e-10;2!DOID:4074;2.60e-10;2!DOID:4905;2.60e-10;2!DOID:3498;2.60e-10;2!DOID:1907;2.60e-10;2!DOID:3093;5.47e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.17e-12,14;DOID:4231,2.07e-10,2;DOID:1907,2.07e-10,2;DOID:4074,2.49e-10,2;DOID:4905,2.49e-10,2;DOID:3498,2.49e-10,2;DOID:3093,5.15e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.75e-18!12;UBERON:0003729!1.16e-11!5;UBERON:0003343!7.65e-09!4;UBERON:0004785!7.65e-09!4;UBERON:0003350!3.78e-07!5 | |ontology_enrichment_uberon=UBERON:0000344!4.75e-18!12;UBERON:0003729!1.16e-11!5;UBERON:0003343!7.65e-09!4;UBERON:0004785!7.65e-09!4;UBERON:0003350!3.78e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.18e-19;1!UBERON:0001723;2.71e-07;3!UBERON:0001033;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.30e-19,1;UBERON:0001723,3.16e-07,3;UBERON:0001033,3.16e-07,3;UBERON:0010056,3.16e-07,3 | |||
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| ||
|short_description=p@chr6:3209188..3209193,- | |short_description=p@chr6:3209188..3209193,- | ||
}} | }} |
Latest revision as of 00:16, 31 July 2015
Short description: | p@chr6:3209188..3209193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:3209188..3209193, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.35e-07 | 3 |
branched duct epithelial cell | 3.35e-07 | 3 |
tracheal epithelial cell | 3.35e-07 | 3 |
tracheoblast | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.30e-19 | 1 |
tongue | 3.16e-07 | 3 |
gustatory system | 3.16e-07 | 3 |
future tongue | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.17e-12 | 14 |
histiocytoma | 2.07e-10 | 2 |
malignant fibroxanthoma | 2.07e-10 | 2 |
pancreas adenocarcinoma | 2.49e-10 | 2 |
pancreatic carcinoma | 2.49e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.49e-10 | 2 |
nervous system cancer | 5.15e-07 | 11 |