FFCP PHASE1:Hg19::chr6:41807139..41807143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:41807139..41807143,- | |||
|description=CAGE_peak_at_chr6:41807139..41807143,- | |description=CAGE_peak_at_chr6:41807139..41807143,- | ||
|id=chr6:41807139..41807143,- | |id=chr6:41807139..41807143,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000771;8.68e-28;2!CL:0002591;1.50e-14;1!CL:0000094;1.17e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,8.13e-28,2;CL:0002591,2.41e-14,1;CL:0000094,1.15e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.02e-13!90;UBERON:0001049!2.57e-13!57;UBERON:0005068!2.57e-13!57;UBERON:0006241!2.57e-13!57;UBERON:0007135!2.57e-13!57;UBERON:0003075!4.39e-13!86;UBERON:0007284!4.39e-13!86;UBERON:0002780!2.12e-12!41;UBERON:0001890!2.12e-12!41;UBERON:0006240!2.12e-12!41;UBERON:0003080!7.64e-12!42;UBERON:0007023!1.96e-11!115;UBERON:0002616!1.96e-10!59;UBERON:0001893!3.62e-10!34;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0002791!7.85e-10!33;UBERON:0000955!1.80e-09!69;UBERON:0006238!1.80e-09!69;UBERON:0001017!3.95e-09!82;UBERON:0001869!4.25e-09!32;UBERON:0005743!1.01e-08!86;UBERON:0003056!1.25e-08!61;UBERON:0002619!2.00e-08!22;UBERON:0001950!2.32e-08!20;UBERON:0000073!5.28e-08!94;UBERON:0001016!5.28e-08!94;UBERON:0000956!6.69e-08!25;UBERON:0000203!6.69e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.45e-10;20!UBERON:0002619;1.85e-09;22!UBERON:0000956;2.15e-08;25!UBERON:0000203;2.15e-08;25!UBERON:0001905;3.95e-08;2!UBERON:0002757;3.95e-08;2!UBERON:0010134;3.95e-08;2!UBERON:0005408;3.95e-08;2!UBERON:0001899;3.95e-08;2!UBERON:0002702;6.35e-08;2!UBERON:0000078;6.35e-08;2!UBERON:0002012;6.35e-08;2!UBERON:0008886;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.45e-10,20;UBERON:0002619,1.85e-09,22;UBERON:0000956,2.15e-08,25;UBERON:0000203,2.15e-08,25;UBERON:0001905,4.09e-08,2;UBERON:0002757,4.09e-08,2;UBERON:0010134,4.09e-08,2;UBERON:0005408,4.09e-08,2;UBERON:0001899,4.09e-08,2;UBERON:0002702,4.69e-08,2;UBERON:0002780,7.21e-08,41;UBERON:0001890,7.21e-08,41;UBERON:0003080,7.21e-08,41;UBERON:0006240,7.21e-08,41;UBERON:0000078,8.04e-08,2;UBERON:0007497,8.04e-08,2;UBERON:0003643,8.04e-08,2;UBERON:0003504,8.04e-08,2;UBERON:0003469,8.04e-08,2;UBERON:0003496,8.04e-08,2;UBERON:0002012,8.04e-08,2;UBERON:0008886,8.04e-08,2;UBERON:0007303,8.04e-08,2;UBERON:0002061,8.04e-08,2;UBERON:0005432,8.04e-08,2;UBERON:0004363,8.04e-08,2;UBERON:0003056,1.97e-07,61;UBERON:0003075,2.75e-07,82;UBERON:0007284,2.75e-07,82;UBERON:0002346,6.35e-07,86 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0,0.305653622991805,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0.284338464974843,0,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0,0,0.727752183563449,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03366703667732,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.336255431980582,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0.0915694648183434,0.495056999523528,0,0,0,0,0,0,0,0.322260734604821,0,0.0852266274161009,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.432807638929335,0.284567373393656,0.159426272728822,0,0,0.423347165447766,0,0.280797178113459,0.456469358066384,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906,0.494411622680279,0.63337622438398,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0.21787692703798,0.278847488557207,0.153900517007594,0,0,0.269272933229316,0,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0.948768663620925,0.158936578980379,0,0,0.141353071433941,0,1.99052386215701,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,0.269604531922708,0.802577647298789,0,0.364909578431332,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.379119477770928,0.300646838828985,0,0.664653872707185,0,0,0,1.13843818411917,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0.146178634172371,0.328461828212837,0,0.0882561266915003,0.225980740780532,0,0.19871461170299,0.189932387867636,0.391102765469606,0.320635281006135,0,0,0,0.229073192331831,0,0,0.248505071130865,0,0.135904206073614,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0.157566364614447,0,0.13480708770837,0.196854963029498,0,0,0.681017030557878,0,0,0,0.2249738915515,0,0.303747783290123,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.492555124496034,0,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0.365377795142688,0,0,0.2506898940227,0,0,0,1.77213635993397,0.244052529803926,0.250381861413,0,0.332787154610557,0.496771223531068,0.553394539744923,0,0,0.285465333544967,0.235265819698172,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0.506827321959218,0,0,0,0.553033744606923,0.194860308839388,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.431299245586727,0,0.109209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| ||
|short_description=p@chr6:41807139..41807143,- | |short_description=p@chr6:41807139..41807143,- | ||
}} | }} |
Latest revision as of 01:35, 31 July 2015
Short description: | p@chr6:41807139..41807143, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:41807139..41807143, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 8.13e-28 | 2 |
smooth muscle cell of the pulmonary artery | 2.41e-14 | 1 |
granulocyte | 1.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.45e-10 | 20 |
regional part of cerebral cortex | 1.85e-09 | 22 |
cerebral cortex | 2.15e-08 | 25 |
pallium | 2.15e-08 | 25 |
pineal body | 4.09e-08 | 2 |
regional part of epithalamus | 4.09e-08 | 2 |
secretory circumventricular organ | 4.09e-08 | 2 |
circumventricular organ | 4.09e-08 | 2 |
epithalamus | 4.09e-08 | 2 |
middle frontal gyrus | 4.69e-08 | 2 |
regional part of forebrain | 7.21e-08 | 41 |
forebrain | 7.21e-08 | 41 |
anterior neural tube | 7.21e-08 | 41 |
future forebrain | 7.21e-08 | 41 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.04e-08 | 2 |
developing epithelial placode | 8.04e-08 | 2 |
respiratory system arterial blood vessel | 8.04e-08 | 2 |
respiratory system blood vessel | 8.04e-08 | 2 |
respiratory system artery | 8.04e-08 | 2 |
head blood vessel | 8.04e-08 | 2 |
pulmonary artery | 8.04e-08 | 2 |
pulmonary vascular system | 8.04e-08 | 2 |
pharyngeal vasculature | 8.04e-08 | 2 |
truncus arteriosus | 8.04e-08 | 2 |
aortic sac | 8.04e-08 | 2 |
pharyngeal arch artery | 8.04e-08 | 2 |
pre-chordal neural plate | 1.97e-07 | 61 |
neural plate | 2.75e-07 | 82 |
presumptive neural plate | 2.75e-07 | 82 |
neurectoderm | 6.35e-07 | 86 |