FFCP PHASE1:Hg19::chr6:64151611..64151636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:64151611..64151636,- | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_at_chr6:64151611..64151636,- | |description=CAGE_peak_at_chr6:64151611..64151636,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!5.95e-09!2 | |ontology_enrichment_celltype=CL:0000242!5.95e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.53e-21;1!CL:0002563;9.45e-21;4!CL:0000159;1.82e-11;2!CL:0000123;3.89e-11;2!CL:0002253;3.89e-11;2!CL:0000242;3.89e-11;2!CL:0002231;5.36e-08;3!CL:0000182;1.73e-07;12 | |ontology_enrichment_celltype_v019=CL:0000313;1.53e-21;1!CL:0002563;9.45e-21;4!CL:0000159;1.82e-11;2!CL:0000123;3.89e-11;2!CL:0002253;3.89e-11;2!CL:0000242;3.89e-11;2!CL:0002231;5.36e-08;3!CL:0000182;1.73e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.53e-21,1;CL:0002563,7.74e-21,4;CL:0000159,1.82e-11,2;CL:0002253,3.35e-11,2;CL:0000242,3.70e-11,2;CL:0000223,1.22e-08,58;CL:0002231,5.54e-08,3;CL:0000182,1.85e-07,12;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.13e-08;3!UBERON:0003353;6.13e-08;3 | |ontology_enrichment_development_v019=UBERON:0009847;6.13e-08;3!UBERON:0003353;6.13e-08;3 | ||
|ontology_enrichment_disease=DOID:0050615!1.62e-10!16;DOID:0050687!2.21e-09!143;DOID:162!1.47e-08!235;DOID:1324!1.86e-08!15;DOID:305!2.04e-08!106;DOID:14566!3.13e-08!239 | |ontology_enrichment_disease=DOID:0050615!1.62e-10!16;DOID:0050687!2.21e-09!143;DOID:162!1.47e-08!235;DOID:1324!1.86e-08!15;DOID:305!2.04e-08!106;DOID:14566!3.13e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.53e-21;1 | |ontology_enrichment_disease_v019=DOID:2152;1.53e-21;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.53e-21,1;DOID:305,6.21e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0005911!3.22e-09!82;UBERON:0004921!1.26e-08!129;UBERON:0004185!1.26e-08!129;UBERON:0000077!1.41e-07!130;UBERON:0002048!2.21e-07!22;UBERON:0000117!2.21e-07!22;UBERON:0000171!2.21e-07!22;UBERON:0000170!2.21e-07!22;UBERON:0005597!2.21e-07!22;UBERON:0000118!2.21e-07!22;UBERON:0004807!4.12e-07!28 | |ontology_enrichment_uberon=UBERON:0005911!3.22e-09!82;UBERON:0004921!1.26e-08!129;UBERON:0004185!1.26e-08!129;UBERON:0000077!1.41e-07!130;UBERON:0002048!2.21e-07!22;UBERON:0000117!2.21e-07!22;UBERON:0000171!2.21e-07!22;UBERON:0000170!2.21e-07!22;UBERON:0005597!2.21e-07!22;UBERON:0000118!2.21e-07!22;UBERON:0004807!4.12e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.53e-21;1!UBERON:0001242;9.45e-21;4!UBERON:0001262;9.45e-21;4!UBERON:0004786;9.45e-21;4!UBERON:0004808;9.45e-21;4!UBERON:0001277;9.45e-21;4!UBERON:0000485;2.66e-12;7!UBERON:0003929;2.66e-12;7!UBERON:0004909;1.82e-11;2!UBERON:0003350;6.94e-11;8!UBERON:0002367;3.25e-08;11!UBERON:0010147;3.25e-08;11!UBERON:0003937;1.33e-07;12!UBERON:0005399;1.33e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0004911;1.53e-21;1!UBERON:0001242;9.45e-21;4!UBERON:0001262;9.45e-21;4!UBERON:0004786;9.45e-21;4!UBERON:0004808;9.45e-21;4!UBERON:0001277;9.45e-21;4!UBERON:0000485;2.66e-12;7!UBERON:0003929;2.66e-12;7!UBERON:0004909;1.82e-11;2!UBERON:0003350;6.94e-11;8!UBERON:0002367;3.25e-08;11!UBERON:0010147;3.25e-08;11!UBERON:0003937;1.33e-07;12!UBERON:0005399;1.33e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-21,1;UBERON:0001242,7.74e-21,4;UBERON:0001262,7.74e-21,4;UBERON:0004786,7.74e-21,4;UBERON:0004808,7.74e-21,4;UBERON:0001277,7.74e-21,4;UBERON:0003929,4.15e-13,54;UBERON:0005911,1.29e-11,82;UBERON:0004909,1.82e-11,2;UBERON:0003350,6.29e-11,8;UBERON:0001046,4.72e-10,19;UBERON:0000485,8.09e-10,9;UBERON:0002367,3.37e-08,11;UBERON:0010147,3.37e-08,11;UBERON:0009846,3.37e-08,11;UBERON:0003353,3.37e-08,11;UBERON:0004902,3.37e-08,11;UBERON:0003820,3.37e-08,11;UBERON:0009847,3.37e-08,11;UBERON:0004921,6.52e-08,118;UBERON:0003937,1.37e-07,12;UBERON:0005399,1.37e-07,12 | |||
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| ||
|short_description=p@chr6:64151611..64151636,- | |short_description=p@chr6:64151611..64151636,- | ||
}} | }} |
Latest revision as of 02:40, 31 July 2015
Short description: | p@chr6:64151611..64151636, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:64151611..64151636, - |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.53e-21 | 1 |
intestinal epithelial cell | 7.74e-21 | 4 |
seromucus secreting cell | 1.82e-11 | 2 |
epithelial cell of large intestine | 3.35e-11 | 2 |
Merkel cell | 3.70e-11 | 2 |
endodermal cell | 1.22e-08 | 58 |
epithelial cell of prostate | 5.54e-08 | 3 |
hepatocyte | 1.85e-07 | 12 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-21 | 1 |
intestinal mucosa | 7.74e-21 | 4 |
wall of intestine | 7.74e-21 | 4 |
gastrointestinal system mucosa | 7.74e-21 | 4 |
gastrointestinal system epithelium | 7.74e-21 | 4 |
intestinal epithelium | 7.74e-21 | 4 |
gut epithelium | 4.15e-13 | 54 |
endo-epithelium | 1.29e-11 | 82 |
epithelium of gonad | 1.82e-11 | 2 |
epithelium of mucosa | 6.29e-11 | 8 |
hindgut | 4.72e-10 | 19 |
simple columnar epithelium | 8.09e-10 | 9 |
prostate gland | 3.37e-08 | 11 |
male accessory sex gland | 3.37e-08 | 11 |
embryonic cloacal epithelium | 3.37e-08 | 11 |
epithelium of hindgut | 3.37e-08 | 11 |
urogenital sinus epithelium | 3.37e-08 | 11 |
prostate bud | 3.37e-08 | 11 |
prostate field | 3.37e-08 | 11 |
subdivision of digestive tract | 6.52e-08 | 118 |
sex gland | 1.37e-07 | 12 |
male reproductive gland | 1.37e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.53e-21 | 1 |
carcinoma | 6.21e-09 | 106 |