FFCP PHASE1:Hg19::chr7:131196091..131196119,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:131196091..131196119,+ to FFCP PHASE1:Hg19::chr7:131196091..131196119,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:131196091..131196119,+ | |||
|coexpression_cluster_id=C1090 | |||
|description=CAGE_peak_at_chr7:131196091..131196119,+ | |||
|id=chr7:131196091..131196119,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.35e-10!24;CL:0000213!1.28e-09!57;CL:0000215!1.28e-09!57;CL:0000115!1.12e-08!35;CL:0002078!1.79e-08!44;CL:0000071!4.81e-08!18;CL:0002546!4.81e-08!18;CL:0002319!8.41e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.63e-13;24!CL:0000115;3.57e-12;36!CL:0000071;2.02e-10;18!CL:1000413;7.49e-09;9!CL:0002322;2.68e-08;5!CL:0002078;2.74e-08;45!CL:0000213;2.14e-07;58!CL:0000215;2.14e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.45e-13,36;CL:0002139,3.11e-13,24;CL:0002078,9.38e-13,45;CL:0000213,2.26e-12,58;CL:0000215,2.26e-12,58;CL:0000071,1.26e-10,18;CL:0002546,1.26e-10,18;CL:1000413,6.29e-09,9;CL:0002322,2.44e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.02e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.90e-14!86;UBERON:0000073!1.01e-13!94;UBERON:0001016!1.01e-13!94;UBERON:0007023!2.11e-13!115;UBERON:0001017!7.50e-13!82;UBERON:0001049!7.02e-11!57;UBERON:0005068!7.02e-11!57;UBERON:0006241!7.02e-11!57;UBERON:0007135!7.02e-11!57;UBERON:0002020!1.49e-10!34;UBERON:0003528!1.49e-10!34;UBERON:0003075!1.51e-10!86;UBERON:0007284!1.51e-10!86;UBERON:0000955!1.53e-10!69;UBERON:0006238!1.53e-10!69;UBERON:0002346!4.12e-10!90;UBERON:0002791!6.51e-10!33;UBERON:0001893!6.57e-10!34;UBERON:0002616!7.06e-10!59;UBERON:0002780!7.82e-10!41;UBERON:0001890!7.82e-10!41;UBERON:0006240!7.82e-10!41;UBERON:0003080!2.73e-09!42;UBERON:0001869!3.10e-09!32;UBERON:0000468!3.87e-09!659;UBERON:0001986!4.81e-08!18;UBERON:0004638!4.81e-08!18;UBERON:0004852!4.81e-08!18;UBERON:0000956!7.08e-08!25;UBERON:0000203!7.08e-08!25;UBERON:0003056!2.03e-07!61;UBERON:0000480!2.04e-07!626;UBERON:0000025!2.48e-07!194;UBERON:0004111!2.61e-07!241;UBERON:0000467!2.72e-07!625;UBERON:0000477!2.85e-07!286;UBERON:0001950!9.99e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.02e-10;18!UBERON:0001986;2.02e-10;18!UBERON:0004852;2.02e-10;18!UBERON:0003915;7.49e-09;9!UBERON:0004700;7.49e-09;9!UBERON:0001917;7.49e-09;9!UBERON:0000487;7.00e-08;22!UBERON:0003528;1.63e-07;34!UBERON:0002020;1.63e-07;34!UBERON:0002791;6.36e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.26e-10,18;UBERON:0001986,1.26e-10,18;UBERON:0004852,1.26e-10,18;UBERON:0003915,6.29e-09,9;UBERON:0004700,6.29e-09,9;UBERON:0001917,6.29e-09,9;UBERON:0003528,9.97e-09,34;UBERON:0002020,9.97e-09,34;UBERON:0000487,4.87e-08,22;UBERON:0002791,2.28e-07,32;UBERON:0000073,3.84e-07,53;UBERON:0002616,3.84e-07,53;UBERON:0001017,9.62e-07,81 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,6.55324116390517,5.27533956456907,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0.626909442956176,0.85870796139317,2.05311637609326,5.27279086298172,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0.853015394924529,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,1.44076983047484,0,0,0.649094787309367,0.174129737299267,0.26591592103773,0,0,0,1.39133685156694,2.58070378531837,7.28995053375948,0.56530794192401,4.19499436209906,3.30141650328081,1.46296476575767,0.258416759169329,0.71153252537342,2.34304428935269,5.63961043952806,3.04108842287405,5.36936526605973,1.47065232138347,4.0507097394088,0.892997282840798,0.898117490504679,1.80178368773316,0,0,2.74802615895611,0,0,0,0.993943903390637,0,0,0.573673241497627,0.354668382198357,0,2.1349799145941,0,0,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0.809364721840658,0.98315564691574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3015470483983,0,0.211931901159562,4.20127534518163,0.103052529238439,0.515281080091258,1.67505170698431,14.8523172372314,0.974370051611986,2.27190396819703,0.184099797284599,0.161646056818812,3.19508633264953,1.20902517873168,1.18692414617341,0.57978255948989,0.272746120590835,0,5.48881677583179,5.4337205011809,4.64775771478074,3.42081481550722,9.33587148239825,6.20461510428911,0,0,1.38134921352481,0,0,0.591534000199219,0.674338760312407,0.723033089650446,0.55146986366197,0.217879444092406,0.474541238222193,0.808987848960987,0.392442930250692,0.38474715694639,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,3.03169540298255,3.70388410061289,4.18559134916116,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.51336800074665,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,2.85273810081437,0.723906533337896,0.205476322550383,0.716243852959582,0,0,0,0,0.508189248444927,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,1.66435439510497,0.907170879989041,0.248107807818777,0.767309866440312,1.12264037773229,0.128139149255701,1.53512174720011,0.321707842287215,2.96836132889982,0.616838775210622,0.177561725313127,0.328508624055237,0,1.16210378459959,0.120859449591622,0,0,0,0.182091168006717,0,0.451199612907412,0.385076685522074,0,0,0.316654886678627,1.13733384070897,7.31402932689017,2.15915916102139,4.62681758070868,0,0,0,2.49322802678617,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0.515205058238611,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,1.10273068709225,1.99031692572366,0.876901770507525,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0.423347165447766,0.324621940274555,0.280797178113459,0,0,0,1.01575066680962,0.321176150207399,0,0,0,0,0.223676107892416,0,0.586164286206121,0,0,0,0,0,0.935702702041099,0.146508179271894,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0.994147647766298,1.40669416410513,0,0,0.422250816255987,1.39473591775749,0,0,1.53403023753232,0,0.311039587661807,0.359473404589307,0.179021174675609,0,0.197286811273867,0,0,0,0.927680981618513,0,0.520855522170466,0,0,1.137934482855,0,0.709163045303809,0.689486746482929,0,0.173624994933292,0,2.53252521113357,0,0.331737779793674,0.886642856860642,0.219385397153973,0.435753854075961,0,0.769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,2.82706142867882,0,0,0.0884575645033392,3.05515072466813,0,0.123563938946503,0.104421949505455,0.943615861729479,1.60515529459758,0.468528891450678,1.27718352450966,0.19566461893209,5.34116834975004,1.18375320854817,0,0.30607276163049,1.13735843331278,0.150323419414493,0.103688191397247,1.32930774541437,0.330991955875499,1.88359751044335,1.19472429772959,0.853828638089378,0,0.173559738335131,0.0979923974143777,0,0.52418000472609,0.687944129886466,2.70917727609438,3.87373380556783,6.56923656425674,0.387956065953678,0.0882561266915003,2.25980740780532,3.01492234222852,1.78843150532691,0.50648636764703,1.36885967914362,0.480952921509202,0.640358984218058,3.39676336289621,0,0.114536596165916,0.514784993585894,0.288109595976299,0.49701014226173,0.471388069233591,7.47473133404877,8.682036243923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| ||
|short_description=p@chr7:131196091..131196119,+ | |||
}} | }} |
Latest revision as of 06:11, 31 July 2015
Short description: | p@chr7:131196091..131196119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:131196091..131196119, + |
Coexpression cluster: | C1090_teratocarcinoma_Fibroblast_glioblastoma_kidney_H9_iPS_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.45e-13 | 36 |
endothelial cell of vascular tree | 3.11e-13 | 24 |
meso-epithelial cell | 9.38e-13 | 45 |
lining cell | 2.26e-12 | 58 |
barrier cell | 2.26e-12 | 58 |
blood vessel endothelial cell | 1.26e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.26e-10 | 18 |
endothelial cell of artery | 6.29e-09 | 9 |
embryonic stem cell | 2.44e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.26e-10 | 18 |
endothelium | 1.26e-10 | 18 |
cardiovascular system endothelium | 1.26e-10 | 18 |
endothelial tube | 6.29e-09 | 9 |
arterial system endothelium | 6.29e-09 | 9 |
endothelium of artery | 6.29e-09 | 9 |
brain grey matter | 9.97e-09 | 34 |
gray matter | 9.97e-09 | 34 |
simple squamous epithelium | 4.87e-08 | 22 |
regional part of telencephalon | 2.28e-07 | 32 |
regional part of nervous system | 3.84e-07 | 53 |
regional part of brain | 3.84e-07 | 53 |
central nervous system | 9.62e-07 | 81 |