FFCP PHASE1:Hg19::chr7:141730415..141730422,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:141730415..141730422,+ | |||
|coexpression_cluster_id=C4661 | |||
|description=CAGE_peak_at_chr7:141730415..141730422,+ | |||
|id=chr7:141730415..141730422,+ | |||
|ontology_enrichment_celltype=CL:0002617!4.23e-10!2;CL:0000197!5.68e-08!6;CL:0000098!5.68e-08!6;CL:0002167!5.68e-08!6;CL:0002580!3.89e-07!3;CL:0002541!5.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.18e-21;19!CL:0000197;1.33e-17;6!CL:0000098;1.33e-17;6!CL:0002167;1.33e-17;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.18e-21,19;CL:0000197,1.22e-17,6;CL:0000098,1.22e-17,6;CL:0002167,1.22e-17,6;CL:0000213,3.00e-07,58;CL:0000215,3.00e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.89e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2513;3.58e-26;1!DOID:3451;8.28e-14;2!DOID:4159;8.28e-14;2!DOID:0060122;8.28e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,5.93e-26,1;DOID:3451,1.07e-13,2;DOID:4159,1.07e-13,2;DOID:0060122,1.07e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0002118!5.68e-09!5;UBERON:0004532!5.68e-09!5;UBERON:0000310!1.59e-07!10;UBERON:0000476!5.12e-07!3;UBERON:0000920!5.12e-07!3;UBERON:0001443!7.61e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.69e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,2.61460037580088,2.49932477955143,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,2.70362119990049,2.3195768543631,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,1.52322084867518,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,1.06013487567529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:141730415..141730422,+ | |||
}} |
Latest revision as of 06:50, 31 July 2015
Short description: | p@chr7:141730415..141730422, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:141730415..141730422, + |
Coexpression cluster: | C4661_Mesothelial_mesenchymal_Olfactory_basal_chorionic_mesothelioma_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.18e-21 | 19 |
receptor cell | 1.22e-17 | 6 |
sensory epithelial cell | 1.22e-17 | 6 |
olfactory epithelial cell | 1.22e-17 | 6 |
lining cell | 3.00e-07 | 58 |
barrier cell | 3.00e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.93e-26 | 1 |
skin carcinoma | 1.07e-13 | 2 |
skin cancer | 1.07e-13 | 2 |
integumentary system cancer | 1.07e-13 | 2 |