FFCP PHASE1:Hg19::chr7:150783576..150783596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=116988 | |EntrezGene=entrezgene:116988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16923 | |HGNC=HGNC:16923 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=E7ETI2,E9PAL8,Q96P47,Q86XV5 | |UniProt=uniprot:E7ETI2,uniprot:E9PAL8,uniprot:Q96P47,uniprot:Q86XV5 | ||
|association_with_transcript=-229bp_to_ENST00000397232,NM_001042535,NM_031946,uc003wjf.1,uc003wjg.1,uc010lpy.1_5end | |association_with_transcript=-229bp_to_ENST00000397232,NM_001042535,NM_031946,uc003wjf.1,uc003wjg.1,uc010lpy.1_5end | ||
|cluster_id=chr7:150783576..150783596,+ | |||
|coexpression_cluster_id=C4665 | |coexpression_cluster_id=C4665 | ||
|description=CAGE_peak_3_at_AGAP3_5end | |description=CAGE_peak_3_at_AGAP3_5end |
Revision as of 07:34, 31 July 2015
Short description: | p3@AGAP3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGAP3_5end |
Coexpression cluster: | C4665_CD14_amygdala_brain_temporal_medial_occipital_hippocampus |
Association with transcript: | -229bp_to_ENST00000397232, NM_001042535, NM_031946, uc003wjf.1, uc003wjg.1, uc010lpy.1_5end |
EntrezGene: | 116988 |
HGNC: | 16923 |
UniProt: | E7ETI2E9PAL8Q96P47Q86XV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@AGAP3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.87e-15 | 48 |
phagocyte | 1.87e-15 | 48 |
macrophage dendritic cell progenitor | 2.34e-15 | 61 |
monopoietic cell | 2.71e-14 | 59 |
monocyte | 2.71e-14 | 59 |
monoblast | 2.71e-14 | 59 |
promonocyte | 2.71e-14 | 59 |
granulocyte monocyte progenitor cell | 6.23e-14 | 67 |
endothelial cell | 9.12e-14 | 36 |
classical monocyte | 1.58e-12 | 42 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 1.11e-21 | 56 |
neural rod | 1.11e-21 | 56 |
future spinal cord | 1.11e-21 | 56 |
neural keel | 1.11e-21 | 56 |
regional part of nervous system | 1.90e-20 | 53 |
regional part of brain | 1.90e-20 | 53 |
neural plate | 5.74e-19 | 82 |
presumptive neural plate | 5.74e-19 | 82 |
neurectoderm | 6.12e-19 | 86 |
central nervous system | 6.86e-19 | 81 |
Showing 1 to 10 of 57 entries