FFCP PHASE1:Hg19::chr7:16955957..16955989,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:16955957..16955989,+ | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr7:16955957..16955989,+ | |||
|id=chr7:16955957..16955989,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.70e-12!43;CL:0000066!3.95e-10!254;CL:0000223!8.02e-09!59;CL:0002251!1.83e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.25e-10;5!CL:0000349;1.07e-08;19!CL:0002076;1.58e-08;42!CL:0002536;6.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,4.28e-10,5;CL:0002076,9.49e-09,42;CL:0000349,9.88e-09,19;CL:0000066,8.92e-08,253;CL:0000223,9.30e-08,58;CL:0002536,4.51e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.36e-07!106;DOID:1749!4.94e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.24e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.22e-08,106;DOID:0050687,1.96e-07,143;DOID:1749,2.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.43e-15;7!UBERON:0000478;5.22e-15;24!UBERON:0005631;6.72e-14;10!UBERON:0000158;6.72e-14;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.54e-15,7;UBERON:0000478,3.91e-15,24;UBERON:0004871,2.62e-13,8;UBERON:0005631,2.30e-12,14;UBERON:0000158,2.30e-12,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,2.40285509343189,2.63766978228454,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0,2.21617904538218,1.02000345622126,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.378139268656271,0.443458794925128,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0,0.352303495931295,0.161872944368132,0.280901613404497,0,0.859840221182376,0,0,0.247266929278557,0,0,0.168336113954066,0.625592599359821,0.277064115484183,0,0,0,0,0.358779271377724,0.213557388818567,0,0.900273288253207,0,0.515281080091258,0,0,0,0.252433774244115,0,0,1.06502877754984,0.201504196455281,0.169560592310488,0,1.63647672354501,0.573609190778008,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.73217913656106,0.514703430895577,0.219500570817251,0,0.100528972411631,1.38882667737794,0,1.03993478527958,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,0.850650583454319,0,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.517086863031111,3.57656445851882,0,0,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0.301439377059586,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.902838299183157,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,1.5119514666484,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,1.93375119346596,1.60405176242628,0.368323955743585,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0.541892875087706,0.501689773854853,1.01950509218015,0,0.895499018888713,0,0,0,0,0,0.412164046590889,0,0,0,1.30012049207304,0,0,0,0.460511024178389,0.137836572484531,2.25582514223375,0.580066775656914,0.0852266274161009,0,0.826424576804891,0.192190067365106,2.4246415373971,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0.372158369359667,1.58189712359363,0.190630193923825,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0.491245205065606,0,0,0,0,0.379473173765715,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0.764637207142375,0,0,0,0,0,0,0,0,3.43056302373444,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0.156679895773023,0,0,0,2.01799707191048,0,0,0,0,0,0,0,0,0,0,0,50.1536648294029,0,0,1.89453753271713,0,7.63982351160608,6.23625829748541,13.8222315944654,0,0,0,0.16480387422676,0,0,0,0,0.511343412510774,0.492339221844278,0,0.449341755736634,4.11748701753901,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0,14.2241810356875,32.2902135871813,7.09163045303809,0,1.45802306691627,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,5.99466151408956,0,0.108647371922008,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0.848118428603645,0,0,0,0.611030144933625,2.07564790076435,2.47127877893006,1.98401704060365,0.067401132980677,0,0,0,8.60924323301195,0,0,2.41981432097328,0,0,0,0,0,0,0,0,1.99226682220855,0,3.47119476670262,0.0979923974143777,0.174118413160805,0,0,0.19351266257817,0.146178634172371,0,0,0,0.451961481561065,0.548167698587004,0,0.0633107959558787,10.5597746676794,0.64127056201227,0.426905989478705,0.39961921916426,0.576361668616424,0,0,2.16082196982225,0,0.707082103850386,0.135904206073614,0.209205692624666,4.89591444654345,0.288950589901519,0,0,0,0,2.10309883423452,0,0,0,3.19486400798386,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0.844802692155252,0,0.383830394638891,0,0,0,0,0.864221491201268,0.653174720218818,0,0,16.0164740478296,0,0,0,0,0,3.25064991980226,6.34333520085005,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,2.55336503108073,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0.138348634936231,0.999843263696853,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0,0,0.310874401165561,0,0.477890301491107,0,0.621051827505038,0,0,0,0.300515217994437,0.761610424337591,0,0.363697318405119,0.751873899297419,0.464033759878494,0.398095888698616,0,1.37358282073117,0.336749488765919,0,0.770479321629213,0.643324774124777,0,0.226705925512272,2.31522474323834,0,0.179088841081487,2.47041157728778,0.877136198314828,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0.344429959321631,0,0,0.139879507719444,0.6220772600329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| |||
|short_description=p@chr7:16955957..16955989,+ | |||
}} |
Latest revision as of 08:10, 31 July 2015
Short description: | p@chr7:16955957..16955989, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:16955957..16955989, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 4.28e-10 | 5 |
endo-epithelial cell | 9.49e-09 | 42 |
extraembryonic cell | 9.88e-09 | 19 |
epithelial cell | 8.92e-08 | 253 |
endodermal cell | 9.30e-08 | 58 |
amniotic epithelial cell | 4.51e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.54e-15 | 7 |
extraembryonic structure | 3.91e-15 | 24 |
somatic layer of lateral plate mesoderm | 2.62e-13 | 8 |
extraembryonic membrane | 2.30e-12 | 14 |
membranous layer | 2.30e-12 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.22e-08 | 106 |
cell type cancer | 1.96e-07 | 143 |
squamous cell carcinoma | 2.73e-07 | 14 |