FFCP PHASE1:Hg19::chr7:643196..643205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:643196..643205,+ | |||
|coexpression_cluster_id=C4692 | |coexpression_cluster_id=C4692 | ||
|description=CAGE_peak_at_chr7:643196..643205,+ | |description=CAGE_peak_at_chr7:643196..643205,+ | ||
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|ontology_enrichment_celltype=CL:0000988!8.16e-19!182;CL:0000839!4.44e-18!70;CL:0000557!8.92e-18!71;CL:0000766!2.23e-16!76;CL:0000763!2.72e-16!112;CL:0000049!2.72e-16!112;CL:0002032!2.75e-16!165;CL:0000837!2.75e-16!165;CL:0002057!5.69e-16!42;CL:0002031!6.52e-16!124;CL:0002194!1.01e-15!63;CL:0000576!1.01e-15!63;CL:0000040!1.01e-15!63;CL:0000559!1.01e-15!63;CL:0000037!2.12e-15!172;CL:0000566!2.12e-15!172;CL:0002009!3.81e-15!65;CL:0000860!9.57e-15!45;CL:0000738!1.47e-13!140;CL:0002087!1.62e-13!119;CL:0000080!4.31e-09!6;CL:0000840!6.45e-09!5;CL:0001029!6.45e-09!5 | |ontology_enrichment_celltype=CL:0000988!8.16e-19!182;CL:0000839!4.44e-18!70;CL:0000557!8.92e-18!71;CL:0000766!2.23e-16!76;CL:0000763!2.72e-16!112;CL:0000049!2.72e-16!112;CL:0002032!2.75e-16!165;CL:0000837!2.75e-16!165;CL:0002057!5.69e-16!42;CL:0002031!6.52e-16!124;CL:0002194!1.01e-15!63;CL:0000576!1.01e-15!63;CL:0000040!1.01e-15!63;CL:0000559!1.01e-15!63;CL:0000037!2.12e-15!172;CL:0000566!2.12e-15!172;CL:0002009!3.81e-15!65;CL:0000860!9.57e-15!45;CL:0000738!1.47e-13!140;CL:0002087!1.62e-13!119;CL:0000080!4.31e-09!6;CL:0000840!6.45e-09!5;CL:0001029!6.45e-09!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-16!102;UBERON:0003061!1.52e-16!102;UBERON:0002371!2.19e-15!80;UBERON:0002193!1.10e-14!112;UBERON:0001474!4.54e-14!86;UBERON:0004765!1.85e-11!101;UBERON:0001434!1.85e-11!101;UBERON:0002405!1.22e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!1.52e-16!102;UBERON:0003061!1.52e-16!102;UBERON:0002371!2.19e-15!80;UBERON:0002193!1.10e-14!112;UBERON:0001474!4.54e-14!86;UBERON:0004765!1.85e-11!101;UBERON:0001434!1.85e-11!101;UBERON:0002405!1.22e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.96e-23;10!UBERON:0000178;1.44e-15;15!UBERON:0000179;1.44e-15;15!UBERON:0000463;1.44e-15;15!UBERON:0000478;5.40e-10;24!UBERON:0002390;9.93e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;5.96e-23;10!UBERON:0000178;1.44e-15;15!UBERON:0000179;1.44e-15;15!UBERON:0000463;1.44e-15;15!UBERON:0000478;5.40e-10;24!UBERON:0002390;9.93e-08;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.96e-23,10;UBERON:0000358,5.96e-23,10;UBERON:0000307,5.96e-23,10;UBERON:0000091,5.96e-23,10;UBERON:0000087,5.96e-23,10;UBERON:0007010,5.96e-23,10;UBERON:0007806,5.96e-23,10;UBERON:0008780,5.96e-23,10;UBERON:0005728,5.96e-23,10;UBERON:0000178,1.44e-15,15;UBERON:0000179,1.44e-15,15;UBERON:0000463,1.44e-15,15;UBERON:0000478,5.40e-10,24 | |||
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|short_description=p@chr7:643196..643205,+ | |short_description=p@chr7:643196..643205,+ | ||
}} | }} |
Latest revision as of 11:05, 31 July 2015
Short description: | p@chr7:643196..643205, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:643196..643205, + |
Coexpression cluster: | C4692_anaplastic_cord_Dendritic_hairy_chronic_CD14_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.96e-23 | 10 |
blastocyst | 5.96e-23 | 10 |
blastula | 5.96e-23 | 10 |
bilaminar disc | 5.96e-23 | 10 |
inner cell mass | 5.96e-23 | 10 |
cleaving embryo | 5.96e-23 | 10 |
connecting stalk | 5.96e-23 | 10 |
inner cell mass derived epiblast | 5.96e-23 | 10 |
extraembryonic mesoderm | 5.96e-23 | 10 |
blood | 1.44e-15 | 15 |
haemolymphatic fluid | 1.44e-15 | 15 |
organism substance | 1.44e-15 | 15 |
extraembryonic structure | 5.40e-10 | 24 |