FFCP PHASE1:Hg19::chr7:70228238..70228275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:70228238..70228275,+ | |||
|coexpression_cluster_id=C4694 | |coexpression_cluster_id=C4694 | ||
|description=CAGE_peak_at_chr7:70228238..70228275,+ | |description=CAGE_peak_at_chr7:70228238..70228275,+ | ||
|id=chr7:70228238..70228275,+ | |id=chr7:70228238..70228275,+ | ||
|ontology_enrichment_celltype=CL:0000623;6.91e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000623;6.91e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.80e-07,8;CL:0000623,2.02e-07,3;CL:0000825,2.02e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002791;1.00e-16;32!UBERON:0001869;3.07e-16;32!UBERON:0003528;7.09e-15;34!UBERON:0002020;7.09e-15;34!UBERON:0001893;5.67e-14;34!UBERON:0002619;9.17e-14;22!UBERON:0002780;1.61e-12;41!UBERON:0001890;1.61e-12;41!UBERON:0000956;8.57e-12;25!UBERON:0000203;8.57e-12;25!UBERON:0002420;4.07e-11;9!UBERON:0007245;4.07e-11;9!UBERON:0010009;4.07e-11;9!UBERON:0010011;4.07e-11;9!UBERON:0000454;4.07e-11;9!UBERON:0001950;7.88e-11;20!UBERON:0000073;9.85e-10;53!UBERON:0002616;9.85e-10;53!UBERON:0000125;2.52e-08;9!UBERON:0002308;2.52e-08;9!UBERON:0002021;1.30e-07;5!UBERON:0009663;1.43e-07;7!UBERON:0001016;1.55e-07;83!UBERON:0000349;1.63e-07;5!UBERON:0001017;1.63e-07;75!UBERON:0005383;2.84e-07;3!UBERON:0005382;2.84e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.87e-24!82;UBERON:0005743!1.54e-23!86;UBERON:0000073!2.09e-22!94;UBERON:0001016!2.09e-22!94;UBERON:0001049!8.88e-22!57;UBERON:0005068!8.88e-22!57;UBERON:0006241!8.88e-22!57;UBERON:0007135!8.88e-22!57;UBERON:0000955!2.77e-17!69;UBERON:0006238!2.77e-17!69;UBERON:0002346!4.94e-17!90;UBERON:0002020!5.58e-17!34;UBERON:0003528!5.58e-17!34;UBERON:0002780!8.84e-17!41;UBERON:0001890!8.84e-17!41;UBERON:0006240!8.84e-17!41;UBERON:0002616!1.32e-16!59;UBERON:0003075!1.68e-16!86;UBERON:0007284!1.68e-16!86;UBERON:0002791!2.38e-16!33;UBERON:0001893!2.40e-16!34;UBERON:0000924!2.50e-16!173;UBERON:0006601!2.50e-16!173;UBERON:0007023!4.39e-16!115;UBERON:0003080!5.72e-16!42;UBERON:0004121!9.65e-16!169;UBERON:0001869!1.96e-15!32;UBERON:0000153!4.54e-14!129;UBERON:0007811!4.54e-14!129;UBERON:0000033!2.65e-13!123;UBERON:0003056!2.99e-13!61;UBERON:0000956!1.32e-11!25;UBERON:0000203!1.32e-11!25;UBERON:0002619!4.96e-11!22;UBERON:0001950!1.06e-09!20;UBERON:0002420!1.95e-07!9;UBERON:0007245!1.95e-07!9;UBERON:0010009!1.95e-07!9;UBERON:0010011!1.95e-07!9;UBERON:0000454!1.95e-07!9;UBERON:0003076!4.68e-07!15;UBERON:0003057!4.68e-07!15;UBERON:0002308!5.10e-07!9;UBERON:0000125!5.10e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.00e-16;32!UBERON:0001869;3.07e-16;32!UBERON:0003528;7.09e-15;34!UBERON:0002020;7.09e-15;34!UBERON:0001893;5.67e-14;34!UBERON:0002619;9.17e-14;22!UBERON:0002780;1.61e-12;41!UBERON:0001890;1.61e-12;41!UBERON:0000956;8.57e-12;25!UBERON:0000203;8.57e-12;25!UBERON:0002420;4.07e-11;9!UBERON:0007245;4.07e-11;9!UBERON:0010009;4.07e-11;9!UBERON:0010011;4.07e-11;9!UBERON:0000454;4.07e-11;9!UBERON:0001950;7.88e-11;20!UBERON:0000073;9.85e-10;53!UBERON:0002616;9.85e-10;53!UBERON:0000125;2.52e-08;9!UBERON:0002308;2.52e-08;9!UBERON:0002021;1.30e-07;5!UBERON:0009663;1.43e-07;7!UBERON:0001016;1.55e-07;83!UBERON:0000349;1.63e-07;5!UBERON:0001017;1.63e-07;75!UBERON:0005383;2.84e-07;3!UBERON:0005382;2.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.50e-19,81;UBERON:0001016,1.90e-19,89;UBERON:0003528,6.01e-19,34;UBERON:0002020,6.01e-19,34;UBERON:0001049,4.10e-18,56;UBERON:0005068,4.10e-18,56;UBERON:0006241,4.10e-18,56;UBERON:0007135,4.10e-18,56;UBERON:0002791,4.72e-18,32;UBERON:0001869,4.72e-18,32;UBERON:0000073,8.74e-18,53;UBERON:0002616,8.74e-18,53;UBERON:0001893,9.95e-17,34;UBERON:0002780,1.38e-16,41;UBERON:0001890,1.38e-16,41;UBERON:0003080,1.38e-16,41;UBERON:0006240,1.38e-16,41;UBERON:0002346,4.52e-16,86;UBERON:0010371,5.58e-16,104;UBERON:0003075,7.01e-16,82;UBERON:0007284,7.01e-16,82;UBERON:0003056,9.94e-16,61;UBERON:0000955,5.93e-15,68;UBERON:0006238,5.93e-15,68;UBERON:0004121,1.37e-14,171;UBERON:0000924,1.37e-14,171;UBERON:0006601,1.37e-14,171;UBERON:0002619,5.07e-14,22;UBERON:0002420,4.82e-12,9;UBERON:0007245,4.82e-12,9;UBERON:0010009,4.82e-12,9;UBERON:0010011,4.82e-12,9;UBERON:0000454,4.82e-12,9;UBERON:0000956,5.12e-12,25;UBERON:0000203,5.12e-12,25;UBERON:0001950,5.42e-11,20;UBERON:0000125,7.07e-09,9;UBERON:0002308,7.07e-09,9;UBERON:0009663,3.65e-08,7;UBERON:0000349,6.35e-08,5;UBERON:0005383,1.16e-07,3;UBERON:0005382,1.16e-07,3;UBERON:0002021,2.38e-07,5;UBERON:0010314,5.00e-07,132;UBERON:0011216,5.85e-07,223;UBERON:0007023,6.14e-07,114 | |||
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| ||
|short_description=p@chr7:70228238..70228275,+ | |short_description=p@chr7:70228238..70228275,+ | ||
}} | }} |
Latest revision as of 11:20, 31 July 2015
Short description: | p@chr7:70228238..70228275, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:70228238..70228275, + |
Coexpression cluster: | C4694_Mast_Neurons_parietal_small_medulloblastoma_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.80e-07 | 8 |
natural killer cell | 2.02e-07 | 3 |
pro-NK cell | 2.02e-07 | 3 |