FFCP PHASE1:Hg19::chr7:93690403..93690432,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000438538_5end | |association_with_transcript=-20bp_to_ENST00000438538_5end | ||
|cluster_id=chr7:93690403..93690432,+ | |||
|coexpression_cluster_id=C2908 | |coexpression_cluster_id=C2908 | ||
|description=CAGE_peak_2_at_ENST00000438538_5end | |description=CAGE_peak_2_at_ENST00000438538_5end | ||
|id=chr7:93690403..93690432,+ | |id=chr7:93690403..93690432,+ | ||
|ontology_enrichment_celltype=CL:0000048!4.29e-15!430;CL:0000723!1.86e-14!436;CL:0002057!2.59e-14!42;CL:0000034!1.22e-13!444;CL:0000860!7.57e-13!45;CL:0000680!2.70e-11!57;CL:0000056!2.70e-11!57;CL:0000355!2.70e-11!57;CL:0002371!2.14e-10!591;CL:0000187!2.44e-10!54;CL:0000144!7.70e-10!625;CL:0000183!9.96e-10!59;CL:0000548!2.35e-09!679;CL:0000004!2.35e-09!679;CL:0000255!2.35e-09!679;CL:0000012!3.81e-09!682;CL:0002009!6.26e-09!65;CL:0002194!1.12e-08!63;CL:0000576!1.12e-08!63;CL:0000040!1.12e-08!63;CL:0000559!1.12e-08!63;CL:0000393!1.39e-08!60;CL:0000211!1.39e-08!60;CL:0000055!6.01e-08!180;CL:0000192!1.38e-07!42;CL:0000514!1.38e-07!42;CL:0000557!1.45e-07!71;CL:0000134!1.69e-07!358;CL:0000839!4.08e-07!70;CL:0002320!5.70e-07!365;CL:0000359!5.81e-07!32;CL:0000219!5.88e-07!390;CL:0000003!6.01e-07!722 | |ontology_enrichment_celltype=CL:0000048!4.29e-15!430;CL:0000723!1.86e-14!436;CL:0002057!2.59e-14!42;CL:0000034!1.22e-13!444;CL:0000860!7.57e-13!45;CL:0000680!2.70e-11!57;CL:0000056!2.70e-11!57;CL:0000355!2.70e-11!57;CL:0002371!2.14e-10!591;CL:0000187!2.44e-10!54;CL:0000144!7.70e-10!625;CL:0000183!9.96e-10!59;CL:0000548!2.35e-09!679;CL:0000004!2.35e-09!679;CL:0000255!2.35e-09!679;CL:0000012!3.81e-09!682;CL:0002009!6.26e-09!65;CL:0002194!1.12e-08!63;CL:0000576!1.12e-08!63;CL:0000040!1.12e-08!63;CL:0000559!1.12e-08!63;CL:0000393!1.39e-08!60;CL:0000211!1.39e-08!60;CL:0000055!6.01e-08!180;CL:0000192!1.38e-07!42;CL:0000514!1.38e-07!42;CL:0000557!1.45e-07!71;CL:0000134!1.69e-07!358;CL:0000839!4.08e-07!70;CL:0002320!5.70e-07!365;CL:0000359!5.81e-07!32;CL:0000219!5.88e-07!390;CL:0000003!6.01e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.41e-10;33!CL:0002057;3.41e-10;33!CL:0000473;4.62e-08;39!CL:0000234;4.62e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.32e-09,42;CL:0002057,9.32e-09,42;CL:0000473,2.35e-07,48;CL:0000234,2.35e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!2.02e-14!14;DOID:120!2.09e-08!27;DOID:193!1.51e-07!29 | |ontology_enrichment_disease=DOID:2394!2.02e-14!14;DOID:120!2.09e-08!27;DOID:193!1.51e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.23e-28;14!DOID:120;4.22e-19;27!DOID:193;1.45e-17;29!DOID:0060072;2.80e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.08e-28,14;DOID:120,5.27e-19,27;DOID:193,1.78e-17,29;DOID:0060072,1.90e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!9.87e-13!167;UBERON:0001134!4.95e-10!61;UBERON:0002036!4.95e-10!61;UBERON:0003082!4.95e-10!61;UBERON:0002385!1.82e-09!63;UBERON:0001015!1.82e-09!63;UBERON:0000383!1.82e-09!63;UBERON:0004290!2.61e-09!70;UBERON:0000992!1.34e-08!13;UBERON:0002119!1.92e-07!4;UBERON:0004531!1.92e-07!4;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0002384!6.55e-07!375;UBERON:0000486!8.19e-07!82 | |ontology_enrichment_uberon=UBERON:0002204!9.87e-13!167;UBERON:0001134!4.95e-10!61;UBERON:0002036!4.95e-10!61;UBERON:0003082!4.95e-10!61;UBERON:0002385!1.82e-09!63;UBERON:0001015!1.82e-09!63;UBERON:0000383!1.82e-09!63;UBERON:0004290!2.61e-09!70;UBERON:0000992!1.34e-08!13;UBERON:0002119!1.92e-07!4;UBERON:0004531!1.92e-07!4;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0002384!6.55e-07!375;UBERON:0000486!8.19e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.81e-16;13!UBERON:0002119;5.22e-15;4!UBERON:0003134;8.36e-14;33!UBERON:0000991;7.07e-12;21!UBERON:0002118;2.68e-11;5!UBERON:0003100;6.00e-10;41!UBERON:0000474;6.56e-10;37!UBERON:0003133;1.03e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.39e-16,13;UBERON:0002119,5.82e-15,4;UBERON:0003134,4.76e-13,37;UBERON:0000474,4.76e-13,37;UBERON:0000991,7.28e-12,21;UBERON:0009196,7.28e-12,21;UBERON:0009117,7.28e-12,21;UBERON:0005564,7.28e-12,21;UBERON:0003100,1.76e-11,41;UBERON:0004176,3.03e-11,22;UBERON:0002118,3.16e-11,5;UBERON:0003133,6.17e-11,48;UBERON:0005156,2.65e-08,59;UBERON:0000990,2.65e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.436194716338694,0,0,2.55671940596253,0.822335776043652,0.309706370895104,2.01384674625505,0.768482119587302,0.236482229888585,2.41321976515633,3.87290810150296,1.35426486594342,2.07066573496865,0.818718450173537,0.898893937780338,2.75475503133812,2.24650318953266,0.639337125799041,0,0,0,2.03146467040009,0.56738522469114,0.622822248995575,2.00998932205395,1.0429658368404,0.217188844705117,0.605399502633369,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0.896692083310806,0.23486899728753,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.635795703478686,0,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.535908257668,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0.537182889719687,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,1.3878872442239,0.887808626565635,0.492762936082855,1.03850885836724,0.464841513839837,0,0,0,0,0,0,1.35359883872224,5.54510427151786,0.784349769176855,0,10.4496112603947,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0,0.15350367472613,0.275673144969061,0.644521469209642,0,1.19317278382541,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0.532306030317022,1.73986598415015,0.74129687641568,0.286249773483982,0,0,0,0,0,0.95460974377781,2.35484592059769,0.179872457583315,0.274537029736055,0.589062011728432,0.404364963146632,0,3.37006764991185,0,1.46228093778771,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0.35667105148125,2.48332744849418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67140892054974,1.6480387422676,0,0,0,0,0.102268682502155,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,10.7305890319614,0,0,0.801588202515337,0,0,0,0,0,0,7.95216227618768,0,0.135904206073614,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.316801009558219,12.3708264139663,0,0,0,0,0,1.72844298240254,2.61269888087527,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,1.04478362020812,0.934853239388898,0.554805861502613,0.947015026375446,0,0,0.457680136793847,0,1.08806040407946,1.62640664988597,3.02663857611035,11.2450778040901,3.57104800815397,10.3676551960214,4.25346743292792,2.08698024724694,1.35231848097497,0,1.22061219961398,2.18218391043071,4.51124339578452,5.10437135866343,0,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.982829546539238,1.2288645437686,0,0,0,0,0,2.20927140302209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,6.0459725541214,3.8220135030964,0,0,0.116241425368125,0,0,0,0,0,0,3.0766320189947,2.8120423570522,0,0,4.03268301363616,6.68877257284203,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,19.409217944363,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.436194716338694,0,0,2.55671940596253,0.822335776043652,0.309706370895104,2.01384674625505,0.768482119587302,0.236482229888585,2.41321976515633,3.87290810150296,1.35426486594342,2.07066573496865,0.818718450173537,0.898893937780338,2.75475503133812,2.24650318953266,0.639337125799041,0,0,0,2.03146467040009,0.56738522469114,0.622822248995575,2.00998932205395,1.0429658368404,0.217188844705117,0.605399502633369,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0.896692083310806,0.23486899728753,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.635795703478686,0,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.535908257668,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0.537182889719687,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,1.3878872442239,0.887808626565635,0.492762936082855,1.03850885836724,0.464841513839837,0,0,0,0,0,0,1.35359883872224,5.54510427151786,0.784349769176855,0,10.4496112603947,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0,0.15350367472613,0.275673144969061,0.644521469209642,0,1.19317278382541,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0.532306030317022,1.73986598415015,0.74129687641568,0.286249773483982,0,0,0,0,0,0.95460974377781,2.35484592059769,0.179872457583315,0.274537029736055,0.589062011728432,0.404364963146632,0,3.37006764991185,0,1.46228093778771,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0.35667105148125,2.48332744849418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67140892054974,1.6480387422676,0,0,0,0,0.102268682502155,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,10.7305890319614,0,0,0.801588202515337,0,0,0,0,0,0,7.95216227618768,0,0.135904206073614,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.316801009558219,12.3708264139663,0,0,0,0,0,1.72844298240254,2.61269888087527,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,1.04478362020812,0.934853239388898,0.554805861502613,0.947015026375446,0,0,0.457680136793847,0,1.08806040407946,1.62640664988597,3.02663857611035,11.2450778040901,3.57104800815397,10.3676551960214,4.25346743292792,2.08698024724694,1.35231848097497,0,1.22061219961398,2.18218391043071,4.51124339578452,5.10437135866343,0,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.982829546539238,1.2288645437686,0,0,0,0,0,2.20927140302209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,6.0459725541214,3.8220135030964,0,0,0.116241425368125,0,0,0,0,0,0,3.0766320189947,2.8120423570522,0,0,4.03268301363616,6.68877257284203,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,19.409217944363,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p2@ENST00000438538 | |short_description=p2@ENST00000438538 | ||
}} | }} |
Latest revision as of 12:40, 31 July 2015
Short description: | p2@ENST00000438538 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000438538_5end |
Coexpression cluster: | C2908_squamous_fibrous_large_mesenchymal_giant_Renal_serous |
Association with transcript: | -20bp_to_ENST00000438538_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.32e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.32e-09 | 42 |
defensive cell | 2.35e-07 | 48 |
phagocyte | 2.35e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.39e-16 | 13 |
left ovary | 5.82e-15 | 4 |
female reproductive organ | 4.76e-13 | 37 |
female reproductive system | 4.76e-13 | 37 |
gonad | 7.28e-12 | 21 |
indifferent external genitalia | 7.28e-12 | 21 |
indifferent gonad | 7.28e-12 | 21 |
gonad primordium | 7.28e-12 | 21 |
female organism | 1.76e-11 | 41 |
external genitalia | 3.03e-11 | 22 |
right ovary | 3.16e-11 | 5 |
reproductive organ | 6.17e-11 | 48 |
reproductive structure | 2.65e-08 | 59 |
reproductive system | 2.65e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.08e-28 | 14 |
female reproductive organ cancer | 5.27e-19 | 27 |
reproductive organ cancer | 1.78e-17 | 29 |
benign neoplasm | 1.90e-08 | 4 |