FFCP PHASE1:Hg19::chr8:119800776..119800782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:119800776..119800782,+ | |||
|coexpression_cluster_id=C3482 | |||
|description=CAGE_peak_at_chr8:119800776..119800782,+ | |description=CAGE_peak_at_chr8:119800776..119800782,+ | ||
|id=chr8:119800776..119800782,+ | |id=chr8:119800776..119800782,+ | ||
|ontology_enrichment_celltype=CL:0002334!1.77e-15!12;CL:0000057!9.59e-14!75;CL:0002579!6.13e-13!3;CL:0002580!2.58e-12!3;CL:0000197!6.35e-10!6;CL:0000098!6.35e-10!6;CL:0002167!6.35e-10!6;CL:0000055!1.45e-09!180;CL:0002617!4.82e-09!2 | |ontology_enrichment_celltype=CL:0002334!1.77e-15!12;CL:0000057!9.59e-14!75;CL:0002579!6.13e-13!3;CL:0002580!2.58e-12!3;CL:0000197!6.35e-10!6;CL:0000098!6.35e-10!6;CL:0002167!6.35e-10!6;CL:0000055!1.45e-09!180;CL:0002617!4.82e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.70e-27;3!CL:1000428;1.70e-27;3!CL:0002579;3.11e-27;3!CL:0002334;1.23e-26;12!CL:0000511;4.66e-21;1!CL:0002625;4.66e-21;1!CL:0002581;4.66e-21;1!CL:0000216;4.66e-21;1!CL:0002559;6.15e-17;5!CL:0002580;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.59e-27,3;CL:0000346,1.82e-27,3;CL:1000428,1.82e-27,3;CL:0002334,9.46e-27,12;CL:0000511,2.82e-21,1;CL:0002625,2.82e-21,1;CL:0000216,2.82e-21,1;CL:0002581,4.22e-21,1;CL:0002559,6.40e-17,5;CL:0000057,2.46e-09,76;CL:0002580,7.26e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!4.60e-11!6;UBERON:0002358!4.60e-11!6;UBERON:0003684!4.60e-11!6;UBERON:0001178!4.60e-11!6;UBERON:0000310!1.19e-09!10;UBERON:0001443!9.64e-09!11 | |ontology_enrichment_uberon=UBERON:0003688!4.60e-11!6;UBERON:0002358!4.60e-11!6;UBERON:0003684!4.60e-11!6;UBERON:0001178!4.60e-11!6;UBERON:0000310!1.19e-09!10;UBERON:0001443!9.64e-09!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.70e-27;3!UBERON:0001992;1.70e-27;3!UBERON:0001136;4.66e-21;1!UBERON:0001343;4.66e-21;1!UBERON:0004910;4.66e-21;1!UBERON:0004813;4.66e-21;1!UBERON:0002073;6.15e-17;5!UBERON:0003688;3.71e-14;6!UBERON:0002358;3.71e-14;6!UBERON:0003684;3.71e-14;6!UBERON:0001178;3.71e-14;6!UBERON:0004909;3.18e-11;2!UBERON:0005406;3.18e-11;2!UBERON:0002067;7.57e-10;9!UBERON:0004457;9.23e-10;9!UBERON:0000042;9.23e-10;9!UBERON:0004923;7.03e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.82e-27,3;UBERON:0001992,1.82e-27,3;UBERON:0001136,2.82e-21,1;UBERON:0001343,2.82e-21,1;UBERON:0004910,2.82e-21,1;UBERON:0005154,2.82e-21,1;UBERON:0005295,2.82e-21,1;UBERON:0004813,2.82e-21,1;UBERON:0005297,2.82e-21,1;UBERON:0005294,2.82e-21,1;UBERON:0010141,2.82e-21,1;UBERON:0005891,2.82e-21,1;UBERON:0002073,6.40e-17,5;UBERON:0005086,6.40e-17,5;UBERON:0003688,2.66e-14,6;UBERON:0002358,2.66e-14,6;UBERON:0003684,2.66e-14,6;UBERON:0001178,2.66e-14,6;UBERON:0004909,2.47e-11,2;UBERON:0005406,3.02e-11,2;UBERON:0002067,7.74e-10,9;UBERON:0004016,7.74e-10,9;UBERON:0010083,7.74e-10,9;UBERON:0004923,1.07e-07,66;UBERON:0004457,1.29e-07,12;UBERON:0000042,1.29e-07,12 | |||
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|phase1_expression=0.908391896352783,0.642301571672949,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,6.09082231740807,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.877955241761676,1.22595118319608,0.300476117813194,0,0,0.213557388818567,0.847727604638247,0,0,0,0,0,0.292311015483596,0,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.630809660135739,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,0.61384789315225,0.280660094433074,1.53766979106841,0.511707249066704,1.60853921143608,1.48418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0062716070103,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:119800776..119800782,+ | |short_description=p@chr8:119800776..119800782,+ | ||
}} | }} |
Latest revision as of 14:22, 31 July 2015
Short description: | p@chr8:119800776..119800782, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:119800776..119800782, + |
Coexpression cluster: | C3482_Fibroblast_Hair_Preadipocyte_Smooth_mesenchymal_Adipocyte_Keratocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.59e-27 | 3 |
hair follicle dermal papilla cell | 1.82e-27 | 3 |
stem cell of epidermis | 1.82e-27 | 3 |
preadipocyte | 9.46e-27 | 12 |
androgen binding protein secreting cell | 2.82e-21 | 1 |
seminiferous tubule epithelial cell | 2.82e-21 | 1 |
Sertoli cell | 2.82e-21 | 1 |
perirenal preadipocyte | 4.22e-21 | 1 |
hair follicle cell | 6.40e-17 | 5 |
fibroblast | 2.46e-09 | 76 |
preadipocyte of the breast | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.82e-27 | 3 |
papillary layer of dermis | 1.82e-27 | 3 |
mesothelium | 2.82e-21 | 1 |
seminiferous tubule of testis | 2.82e-21 | 1 |
epithelium of male gonad | 2.82e-21 | 1 |
epithelial cord | 2.82e-21 | 1 |
sex cord | 2.82e-21 | 1 |
seminiferous tubule epithelium | 2.82e-21 | 1 |
testis sex cord | 2.82e-21 | 1 |
genital ridge | 2.82e-21 | 1 |
primitive sex cord of indifferent gonad | 2.82e-21 | 1 |
coelomic epithelium | 2.82e-21 | 1 |
hair follicle | 6.40e-17 | 5 |
hair follicle placode | 6.40e-17 | 5 |
omentum | 2.66e-14 | 6 |
peritoneum | 2.66e-14 | 6 |
abdominal cavity | 2.66e-14 | 6 |
visceral peritoneum | 2.66e-14 | 6 |
epithelium of gonad | 2.47e-11 | 2 |
perirenal fat | 3.02e-11 | 2 |
dermis | 7.74e-10 | 9 |
dermatome | 7.74e-10 | 9 |
future dermis | 7.74e-10 | 9 |
organ component layer | 1.07e-07 | 66 |
cavity lining | 1.29e-07 | 12 |
serous membrane | 1.29e-07 | 12 |