FFCP PHASE1:Hg19::chr8:120164231..120164239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:120164231..120164239,+ | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_at_chr8:120164231..120164239,+ | |description=CAGE_peak_at_chr8:120164231..120164239,+ | ||
|id=chr8:120164231..120164239,+ | |id=chr8:120164231..120164239,+ | ||
|ontology_enrichment_celltype=CL:0001014!2.18e-34!2;CL:0001016!2.18e-34!2;CL:0000453!2.11e-14!5;CL:0000840!3.64e-12!5;CL:0001029!3.64e-12!5;CL:0002253!9.46e-10!2;CL:0000990!2.05e-08!8;CL:0000451!4.85e-07!10 | |ontology_enrichment_celltype=CL:0001014!2.18e-34!2;CL:0001016!2.18e-34!2;CL:0000453!2.11e-14!5;CL:0000840!3.64e-12!5;CL:0001029!3.64e-12!5;CL:0002253!9.46e-10!2;CL:0000990!2.05e-08!8;CL:0000451!4.85e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.56e-26;2!CL:0001016;5.56e-26;2!CL:0002253;7.14e-26;2!CL:0002563;1.13e-13;4!CL:0000453;2.94e-11;5!CL:0000840;1.32e-09;5!CL:0000990;7.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.56e-26,2;CL:0001016,5.56e-26,2;CL:0002253,7.14e-26,2;CL:0002563,1.13e-13,4;CL:0000453,2.94e-11,5;CL:0000840,1.32e-09,5;CL:0001029,1.32e-09,5;CL:0000990,7.91e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.13e-07;31 | |||
|ontology_enrichment_disease=DOID:2355!1.70e-17!1;DOID:74!2.02e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.17e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.17e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0000996!6.23e-18!1;UBERON:0000989!7.37e-18!1;UBERON:0008811!7.37e-18!1;UBERON:0006258!7.37e-18!1;UBERON:0005876!7.37e-18!1;UBERON:0004874!7.37e-18!1;UBERON:0001052!7.39e-18!4;UBERON:0004907!1.72e-14!5;UBERON:0000059!2.05e-14!11;UBERON:0000160!6.83e-10!27;UBERON:0000341!1.57e-09!2;UBERON:0001046!1.42e-08!19;UBERON:0001155!2.05e-08!9;UBERON:0005409!9.45e-08!35;UBERON:0000974!1.79e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;4.00e-50;4!UBERON:0000059;5.35e-41;11!UBERON:0004907;2.22e-40;5!UBERON:0000160;1.66e-25;17!UBERON:0001155;7.17e-23;9!UBERON:0005409;3.39e-20;22!UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0004921;1.73e-12;33!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,4.00e-50,4;UBERON:0000059,5.35e-41,11;UBERON:0004907,2.22e-40,5;UBERON:0000160,1.66e-25,17;UBERON:0001155,7.17e-23,9;UBERON:0005409,5.50e-18,25;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0001046,1.63e-11,19;UBERON:0003350,1.69e-07,8;UBERON:0000485,8.37e-07,9 | |||
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|short_description=p@chr8:120164231..120164239,+ | |short_description=p@chr8:120164231..120164239,+ | ||
}} | }} |
Latest revision as of 14:23, 31 July 2015
Short description: | p@chr8:120164231..120164239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:120164231..120164239, + |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.56e-26 | 2 |
immature CD1a-positive Langerhans cell | 5.56e-26 | 2 |
epithelial cell of large intestine | 7.14e-26 | 2 |
intestinal epithelial cell | 1.13e-13 | 4 |
Langerhans cell | 2.94e-11 | 5 |
immature conventional dendritic cell | 1.32e-09 | 5 |
common dendritic progenitor | 1.32e-09 | 5 |
conventional dendritic cell | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
rectum | 4.00e-50 | 4 |
large intestine | 5.35e-41 | 11 |
lower digestive tract | 2.22e-40 | 5 |
intestine | 1.66e-25 | 17 |
colon | 7.17e-23 | 9 |
gastrointestinal system | 5.50e-18 | 25 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
hindgut | 1.63e-11 | 19 |
epithelium of mucosa | 1.69e-07 | 8 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.17e-15 | 14 |