FFCP PHASE1:Hg19::chr9:118358956..118358970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:118358956..118358970,+ | |||
|coexpression_cluster_id=C4793 | |||
|description=CAGE_peak_at_chr9:118358956..118358970,+ | |description=CAGE_peak_at_chr9:118358956..118358970,+ | ||
|id=chr9:118358956..118358970,+ | |id=chr9:118358956..118358970,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.16e-50!180;CL:0000057!2.29e-26!75;CL:0000680!1.88e-23!57;CL:0000056!1.88e-23!57;CL:0000355!1.88e-23!57;CL:0000187!3.13e-23!54;CL:0000359!1.67e-20!32;CL:0000183!9.06e-20!59;CL:0000393!3.74e-19!60;CL:0000211!3.74e-19!60;CL:0000192!1.57e-17!42;CL:0000514!1.57e-17!42;CL:0002620!9.64e-16!23;CL:0000048!5.57e-15!430;CL:0000723!4.25e-14!436;CL:0000034!2.67e-13!444;CL:0000144!9.93e-13!625;CL:0002371!7.40e-12!591;CL:0002494!1.26e-11!16;CL:0000548!1.92e-09!679;CL:0000004!1.92e-09!679;CL:0000255!1.92e-09!679;CL:0000012!4.05e-09!682;CL:0000222!5.18e-09!119;CL:0002539!6.00e-08!10;CL:0000220!3.22e-07!246;CL:0002321!5.62e-07!248;CL:0002334!6.08e-07!12 | |ontology_enrichment_celltype=CL:0000055!6.16e-50!180;CL:0000057!2.29e-26!75;CL:0000680!1.88e-23!57;CL:0000056!1.88e-23!57;CL:0000355!1.88e-23!57;CL:0000187!3.13e-23!54;CL:0000359!1.67e-20!32;CL:0000183!9.06e-20!59;CL:0000393!3.74e-19!60;CL:0000211!3.74e-19!60;CL:0000192!1.57e-17!42;CL:0000514!1.57e-17!42;CL:0002620!9.64e-16!23;CL:0000048!5.57e-15!430;CL:0000723!4.25e-14!436;CL:0000034!2.67e-13!444;CL:0000144!9.93e-13!625;CL:0002371!7.40e-12!591;CL:0002494!1.26e-11!16;CL:0000548!1.92e-09!679;CL:0000004!1.92e-09!679;CL:0000255!1.92e-09!679;CL:0000012!4.05e-09!682;CL:0000222!5.18e-09!119;CL:0002539!6.00e-08!10;CL:0000220!3.22e-07!246;CL:0002321!5.62e-07!248;CL:0002334!6.08e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.23e-22;32!CL:0002620;1.13e-13;23!CL:0002494;9.43e-12;16!CL:0002539;2.15e-11;10!CL:0000192;7.43e-11;43!CL:0000187;1.33e-10;55!CL:0000393;2.59e-09;61!CL:0000211;2.59e-09;61!CL:0000057;3.39e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.85e-23,32;CL:0000057,1.01e-19,76;CL:0000187,1.13e-19,55;CL:0000680,2.12e-19,58;CL:0000056,2.12e-19,58;CL:0000355,2.12e-19,58;CL:0000393,1.05e-16,61;CL:0000211,1.05e-16,61;CL:0000048,5.37e-16,427;CL:0000723,2.39e-15,433;CL:0000192,6.16e-15,43;CL:0000514,6.16e-15,43;CL:0000034,1.63e-14,441;CL:0002620,1.30e-13,23;CL:0002494,6.36e-12,16;CL:0002539,1.28e-11,10;CL:0000222,2.68e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;7.43e-11;43!CL:0000355;9.52e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.58e-08;5!DOID:450;2.58e-08;5!DOID:66;2.58e-08;5!DOID:423;2.58e-08;5!DOID:0080000;2.58e-08;5!DOID:11722;2.58e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.83e-08,5;DOID:450,2.83e-08,5;DOID:66,2.83e-08,5;DOID:423,2.83e-08,5;DOID:0080000,2.83e-08,5;DOID:11722,2.83e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!5.79e-24!70;UBERON:0000914!3.16e-22!83;UBERON:0002329!3.16e-22!83;UBERON:0003077!3.16e-22!83;UBERON:0003059!3.16e-22!83;UBERON:0007282!3.16e-22!83;UBERON:0009618!3.16e-22!83;UBERON:0007285!3.16e-22!83;UBERON:0000486!7.85e-21!82;UBERON:0001134!1.03e-20!61;UBERON:0002036!1.03e-20!61;UBERON:0003082!1.03e-20!61;UBERON:0002385!1.73e-19!63;UBERON:0001015!1.73e-19!63;UBERON:0000383!1.73e-19!63;UBERON:0001637!7.29e-13!42;UBERON:0003509!7.29e-13!42;UBERON:0004572!7.29e-13!42;UBERON:0002097!3.88e-12!40;UBERON:0004872!6.24e-12!84;UBERON:0002199!2.21e-11!45;UBERON:0002416!2.21e-11!45;UBERON:0004573!4.17e-11!33;UBERON:0004571!4.17e-11!33;UBERON:0004535!4.52e-11!110;UBERON:0001009!2.61e-10!113;UBERON:0002049!6.12e-10!79;UBERON:0007798!6.12e-10!79;UBERON:0000948!1.09e-09!24;UBERON:0005498!1.09e-09!24;UBERON:0004140!1.09e-09!24;UBERON:0009881!1.09e-09!24;UBERON:0004141!1.09e-09!24;UBERON:0003084!1.09e-09!24;UBERON:0007005!1.09e-09!24;UBERON:0004139!1.09e-09!24;UBERON:0004291!1.09e-09!24;UBERON:0005256!3.42e-09!143;UBERON:0000475!1.93e-08!365;UBERON:0001981!2.19e-08!60;UBERON:0007500!2.19e-08!60;UBERON:0004537!2.19e-08!60;UBERON:0006965!2.19e-08!60;UBERON:0004237!6.00e-08!10;UBERON:0004695!6.00e-08!10;UBERON:0002111!6.00e-08!10;UBERON:0004178!6.00e-08!10;UBERON:0007100!6.76e-08!27;UBERON:0000055!5.92e-07!69;UBERON:0003914!8.68e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.74e-15;33!UBERON:0004571;9.74e-15;33!UBERON:0001637;5.77e-12;42!UBERON:0003509;5.77e-12;42!UBERON:0004572;5.77e-12;42!UBERON:0004237;2.15e-11;10!UBERON:0004695;2.15e-11;10!UBERON:0002111;2.15e-11;10!UBERON:0004178;2.15e-11;10!UBERON:0000947;5.01e-08;21!UBERON:0010191;5.01e-08;21!UBERON:0002097;8.54e-08;41!UBERON:0000948;1.24e-07;22!UBERON:0002385;2.41e-07;31!UBERON:0001015;2.41e-07;31!UBERON:0000383;2.41e-07;31!UBERON:0001135;7.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.12e-19,42;UBERON:0003509,5.12e-19,42;UBERON:0004572,5.12e-19,42;UBERON:0001134,1.88e-17,62;UBERON:0002036,1.88e-17,62;UBERON:0003082,1.88e-17,62;UBERON:0002385,1.42e-16,64;UBERON:0001015,1.42e-16,64;UBERON:0000383,1.42e-16,64;UBERON:0002329,2.92e-16,71;UBERON:0003059,2.92e-16,71;UBERON:0007282,2.92e-16,71;UBERON:0004290,2.92e-16,71;UBERON:0009618,2.92e-16,71;UBERON:0003077,6.99e-16,72;UBERON:0007285,6.99e-16,72;UBERON:0004573,1.10e-15,33;UBERON:0004571,1.10e-15,33;UBERON:0007524,1.63e-15,73;UBERON:0004872,8.37e-15,83;UBERON:0007503,8.01e-14,78;UBERON:0000486,2.86e-13,83;UBERON:0004535,4.88e-13,109;UBERON:0001009,2.36e-12,112;UBERON:0004237,1.28e-11,10;UBERON:0004695,1.28e-11,10;UBERON:0002111,1.28e-11,10;UBERON:0004178,1.28e-11,10;UBERON:0007500,4.28e-11,59;UBERON:0001981,4.28e-11,59;UBERON:0004537,4.28e-11,59;UBERON:0006965,4.28e-11,59;UBERON:0002049,5.05e-11,78;UBERON:0007798,5.05e-11,78;UBERON:0003914,4.21e-10,117;UBERON:0002097,7.01e-10,41;UBERON:0000948,4.02e-09,24;UBERON:0005498,4.02e-09,24;UBERON:0004140,4.02e-09,24;UBERON:0009881,4.02e-09,24;UBERON:0004141,4.02e-09,24;UBERON:0003084,4.02e-09,24;UBERON:0007005,4.02e-09,24;UBERON:0004139,4.02e-09,24;UBERON:0004291,4.02e-09,24;UBERON:0002199,4.33e-09,46;UBERON:0002416,4.33e-09,46;UBERON:0000055,1.32e-08,68;UBERON:0000947,4.07e-08,21;UBERON:0010191,4.07e-08,21;UBERON:0007100,1.10e-07,27;UBERON:0005256,1.19e-07,122;UBERON:0001135,5.53e-07,15 | |||
|phase1_expression=1.2717486548939,2.5692062866918,0.704772020479856,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0.247532705920093,0,3.36162573225888,6.62963980826375,5.84248072309899,4.87932798790507,0.246242116153576,0,0,0.572471974262113,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,0.383587685530591,0,2.00535164254356,0.289693037921647,0.795285947051099,0.486634870302636,3.78139268656271,0.665188192387692,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.2663051166458,27.2762912475231,4.58938593198102,0,2.24271040056923,7.47242970107935,0.98667019366864,1.55605517699883,3.3677668017422,1.79808093424805,1.96764655938411,2.30470369792,0.468642863667593,0.936480230490962,0,0.747243402759005,0.704606991862589,0.971237666208789,0.421352420106746,0.61246251376468,0.122834317311768,0.103325781175765,1.18800285728205,1.7308685049499,0,0.718618141816238,0.336672227908132,0,0,1.75591048352335,1.5324389789951,0.600952235626387,1.70148274740032,7.71375433462106,13.0270007179326,2.11931901159562,2.40072876867522,5.25567899116038,9.27505944164265,4.46680455195816,4.38818463827292,2.04617710838517,10.3497847440087,6.71964260088785,2.10139873864455,7.81021103536552,1.91428986632517,2.7129694769678,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0.643240938192885,2.76269842704961,13.4666699129274,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0.927443239800615,1.05667824812239,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,1.45770409648969,0.87192013766656,1.98013371716565,1.80980402060889,0,0,3.45719551560332,0,0,0,0,0.285955987316295,0.542621605391443,0,0.65147236858747,1.77695974371273,0,0,0,0,0,0,0,3.11512312139057,0,0,0.579125226670317,0,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,1.08506009479894,3.11956292296211,1.96271887676878,3.6271555457805,2.34282829985426,3.00946099727719,0,1.03473071292505,1.32845119707087,0.184369168541703,3.99664626553181,0,0,0,0,0,0,0,0,0.992431231275107,9.05425642399569,3.36792113319688,1.66580894032411,2.04682899626681,0.160853921143607,0,0.462629081407967,1.59805552781814,2.05317890034523,2.59627214591811,1.16210378459959,0,0,0,0.34444334449382,0,0.655622074797121,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0.650060246036521,0,1.93341436584244,1.54048617114644,0.614014698904518,1.65403886981437,5.58585273315023,0.870100163485371,1.19317278382541,2.49289699810865,0,0,0,0,2.78907329578371,6.92587163027408,3.485186350803,2.46426864140871,0,1.73986598415015,2.22389062924704,1.43124886741991,1.48863347743867,1.2655176988749,0.190630193923825,0,0,5.72765846266686,3.13979456079692,0.539617372749944,0.274537029736055,0,0.606547444719948,1.58510321173008,1.68503382495592,0,1.46228093778771,2.11300293513511,0.818999468447914,0.141405431953713,1.13008116620243,4.96228809191512,1.32687795048244,0.438450885253763,0,0,5.2756698010303,1.54911749049875,1.97186921772569,0.717056761020258,0.589494246078727,2.49669736036875,0.354761064070598,0.211107635297664,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,3.11039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,5.92498690404406,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,4.12726645207958,0,0,0,0.063186579628488,0,0,0.664653872707185,1.323967823502,0.941798755221676,0,0.284609546029793,0.416024019039416,0,0,0,0,1.0319161948297,0,0,0,0.0969890164884194,0.176512253383001,0,1.09633539717401,0.19871461170299,0,0,0.961905843018405,0,0,0,0,0,0,0,0,0.407712618220842,1.35983700206033,3.05994652908965,0.577901179803038,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0,0.268733889946905,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,1.19730191562487,0,4.60047658820639,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,2.82318983637806,0,0,1.49254802886874,3.73941295755559,3.88364103051829,3.03044808440143,2.0125432140206,1.77962244319307,5.49216164152617,1.36107831386915,1.70980920641059,2.21782724984451,0.955780602982214,1.79921244865442,2.32894435314389,2.90294345488599,1.86089200190596,2.08698024724694,0.150257608997218,0,1.22061219961398,2.00033525122815,0.214821114084977,3.71227007902795,0.796191777397232,0,5.83772698810748,4.04099386519103,11.3566408405786,0,0,2.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| ||
|short_description=p@chr9:118358956..118358970,+ | |short_description=p@chr9:118358956..118358970,+ | ||
}} | }} |
Latest revision as of 22:10, 31 July 2015
Short description: | p@chr9:118358956..118358970, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118358956..118358970, + |
Coexpression cluster: | C4793_Fibroblast_Hair_Skeletal_mesodermal_Preadipocyte_neuroectodermal_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.85e-23 | 32 |
fibroblast | 1.01e-19 | 76 |
muscle cell | 1.13e-19 | 55 |
muscle precursor cell | 2.12e-19 | 58 |
myoblast | 2.12e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.12e-19 | 58 |
electrically responsive cell | 1.05e-16 | 61 |
electrically active cell | 1.05e-16 | 61 |
multi fate stem cell | 5.37e-16 | 427 |
somatic stem cell | 2.39e-15 | 433 |
smooth muscle cell | 6.16e-15 | 43 |
smooth muscle myoblast | 6.16e-15 | 43 |
stem cell | 1.63e-14 | 441 |
skin fibroblast | 1.30e-13 | 23 |
cardiocyte | 6.36e-12 | 16 |
aortic smooth muscle cell | 1.28e-11 | 10 |
mesodermal cell | 2.68e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.83e-08 | 5 |
myotonic disease | 2.83e-08 | 5 |
muscle tissue disease | 2.83e-08 | 5 |
myopathy | 2.83e-08 | 5 |
muscular disease | 2.83e-08 | 5 |
myotonic dystrophy | 2.83e-08 | 5 |