FFCP PHASE1:Hg19::chr9:136856204..136856219,+: Difference between revisions
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|id=chr9:136856204..136856219,+
|short_description=p@chr9:136856204..136856219,+
|description=CAGE_peak_at_chr9:136856204..136856219,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:136856204..136856219,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr9:136856204..136856219,+ | |||
|id=chr9:136856204..136856219,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.45e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.53e-21;1!CL:0002591;5.16e-21;1!CL:0000159;1.82e-11;2!CL:0002262;3.34e-11;2!CL:1000398;3.34e-11;2!CL:0002593;3.34e-11;2!CL:0000182;1.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.53e-21,1;CL:0002591,6.31e-21,1;CL:0000159,1.82e-11,2;CL:0002262,2.73e-11,2;CL:1000398,2.73e-11,2;CL:0002593,4.52e-11,2;CL:0000182,1.47e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.30e-21;1 | |||
|ontology_enrichment_disease=DOID:305!1.08e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.53e-21;1!DOID:4468;2.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.53e-21,1;DOID:4468,2.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.65e-11!9;UBERON:0004872!2.45e-07!84;UBERON:0003914!2.58e-07!118;UBERON:0001981!2.76e-07!60;UBERON:0007500!2.76e-07!60;UBERON:0004537!2.76e-07!60;UBERON:0006965!2.76e-07!60;UBERON:0001557!3.24e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.53e-21;1!UBERON:0003513;2.98e-12;7!UBERON:0004909;1.82e-11;2!UBERON:0001281;3.34e-11;2!UBERON:0003497;3.34e-11;2!UBERON:0003909;3.34e-11;2!UBERON:0000078;3.34e-11;2!UBERON:0003835;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0002456;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0001737;9.65e-10;9!UBERON:0001557;9.65e-10;9!UBERON:0001280;6.78e-08;3!UBERON:0004647;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-21,1;UBERON:0003513,3.15e-12,7;UBERON:0004909,1.82e-11,2;UBERON:0001281,2.73e-11,2;UBERON:0003497,2.73e-11,2;UBERON:0003909,2.73e-11,2;UBERON:0003835,2.73e-11,2;UBERON:0000078,3.70e-11,2;UBERON:0007497,3.70e-11,2;UBERON:0003643,3.70e-11,2;UBERON:0003504,3.70e-11,2;UBERON:0003469,3.70e-11,2;UBERON:0003496,3.70e-11,2;UBERON:0002012,3.70e-11,2;UBERON:0008886,3.70e-11,2;UBERON:0007303,3.70e-11,2;UBERON:0002061,3.70e-11,2;UBERON:0005432,3.70e-11,2;UBERON:0004363,3.70e-11,2;UBERON:0002456,4.52e-11,2;UBERON:0001557,5.35e-10,19;UBERON:0001737,9.24e-10,9;UBERON:0001280,5.93e-08,3;UBERON:0004647,5.93e-08,3;UBERON:0005171,5.93e-08,3;UBERON:0004145,7.26e-08,3 | |||
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| ||
|short_description=p@chr9:136856204..136856219,+ | |||
}} | }} |
Latest revision as of 00:00, 1 August 2015
Short description: | p@chr9:136856204..136856219, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:136856204..136856219, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.53e-21 | 1 |
smooth muscle cell of the pulmonary artery | 6.31e-21 | 1 |
seromucus secreting cell | 1.82e-11 | 2 |
endothelial cell of sinusoid | 2.73e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.73e-11 | 2 |
smooth muscle cell of the internal thoracic artery | 4.52e-11 | 2 |
hepatocyte | 1.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-21 | 1 |
trunk blood vessel | 3.15e-12 | 7 |
epithelium of gonad | 1.82e-11 | 2 |
hepatic sinusoid | 2.73e-11 | 2 |
abdomen blood vessel | 2.73e-11 | 2 |
sinusoid | 2.73e-11 | 2 |
abdominal segment blood vessel | 2.73e-11 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.70e-11 | 2 |
developing epithelial placode | 3.70e-11 | 2 |
respiratory system arterial blood vessel | 3.70e-11 | 2 |
respiratory system blood vessel | 3.70e-11 | 2 |
respiratory system artery | 3.70e-11 | 2 |
head blood vessel | 3.70e-11 | 2 |
pulmonary artery | 3.70e-11 | 2 |
pulmonary vascular system | 3.70e-11 | 2 |
pharyngeal vasculature | 3.70e-11 | 2 |
truncus arteriosus | 3.70e-11 | 2 |
aortic sac | 3.70e-11 | 2 |
pharyngeal arch artery | 3.70e-11 | 2 |
internal thoracic artery | 4.52e-11 | 2 |
upper respiratory tract | 5.35e-10 | 19 |
larynx | 9.24e-10 | 9 |
liver parenchyma | 5.93e-08 | 3 |
liver lobule | 5.93e-08 | 3 |
hepatic duct | 5.93e-08 | 3 |
outflow tract | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.53e-21 | 1 |
clear cell adenocarcinoma | 2.02e-11 | 2 |