FFCP PHASE1:Hg19::chr9:6257212..6257223,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:6257212..6257223,+
|short_description=p@chr9:6257212..6257223,+
|description=CAGE_peak_at_chr9:6257212..6257223,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:6257212..6257223,+ | |||
|coexpression_cluster_id=C1289 | |||
|description=CAGE_peak_at_chr9:6257212..6257223,+ | |||
|id=chr9:6257212..6257223,+ | |||
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|ontology_enrichment_celltype_v019=CL:0002494;9.34e-20;16!CL:0002595;2.26e-17;5!CL:0000359;8.03e-14;32!CL:0000192;4.33e-09;43!CL:0000569;1.51e-08;4!CL:0002593;5.78e-08;2 | |||
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|ontology_enrichment_development_v019=CL:0000514;4.33e-09;43!CL:0000011;1.51e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!3.68e-17!14;DOID:120!7.12e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.08e-35;14!DOID:120;7.08e-17;27!DOID:193;1.62e-15;29!DOID:0060084;9.56e-12;3!DOID:127;9.56e-12;3!DOID:0060072;6.66e-09;4 | |||
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| ||
|short_description=p@chr9:6257212..6257223,+ | |||
}} | }} |
Latest revision as of 02:16, 1 August 2015
Short description: | p@chr9:6257212..6257223, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:6257212..6257223, + |
Coexpression cluster: | C1289_mesenchymal_Smooth_Cardiac_Mesothelial_Sertoli_leiomyoma_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.90e-20 | 16 |
smooth muscle cell of the subclavian artery | 3.60e-17 | 5 |
vascular associated smooth muscle cell | 6.98e-15 | 32 |
smooth muscle cell | 4.60e-12 | 43 |
smooth muscle myoblast | 4.60e-12 | 43 |
muscle cell | 5.95e-12 | 55 |
muscle precursor cell | 3.85e-11 | 58 |
myoblast | 3.85e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.85e-11 | 58 |
electrically responsive cell | 2.07e-10 | 61 |
electrically active cell | 2.07e-10 | 61 |
cardiac mesenchymal cell | 1.55e-08 | 4 |
migratory trunk neural crest cell | 1.55e-08 | 4 |
mesodermal cell | 4.85e-08 | 121 |
smooth muscle cell of the internal thoracic artery | 8.92e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.89e-35 | 14 |
female reproductive organ cancer | 6.86e-17 | 27 |
reproductive organ cancer | 1.57e-15 | 29 |
cell type benign neoplasm | 8.17e-12 | 3 |
leiomyoma | 8.17e-12 | 3 |
benign neoplasm | 5.93e-09 | 4 |