FFCP PHASE1:Hg19::chrX:153596060..153596111,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:153596060..153596111,- | |||
|coexpression_cluster_id=C965 | |||
|description=CAGE_peak_at_chrX:153596060..153596111,- | |description=CAGE_peak_at_chrX:153596060..153596111,- | ||
|id=chrX:153596060..153596111,- | |id=chrX:153596060..153596111,- | ||
|ontology_enrichment_celltype=CL:0002371!3.07e-17!591;CL:0000144!3.26e-17!625;CL:0000548!5.52e-17!679;CL:0000004!5.52e-17!679;CL:0000255!5.52e-17!679;CL:0000012!4.78e-16!682;CL:0000055!5.08e-15!180;CL:0000048!4.79e-13!430;CL:0000723!4.97e-13!436;CL:0000003!1.58e-11!722;CL:0000034!1.84e-11!444;CL:0000057!3.11e-11!75;CL:0002057!1.31e-09!42;CL:0000860!3.38e-09!45;CL:0000063!1.95e-08!578;CL:0002320!4.34e-08!365;CL:0000134!9.08e-08!358;CL:0000192!5.47e-07!42;CL:0000514!5.47e-07!42;CL:0000219!9.67e-07!390 | |ontology_enrichment_celltype=CL:0002371!3.07e-17!591;CL:0000144!3.26e-17!625;CL:0000548!5.52e-17!679;CL:0000004!5.52e-17!679;CL:0000255!5.52e-17!679;CL:0000012!4.78e-16!682;CL:0000055!5.08e-15!180;CL:0000048!4.79e-13!430;CL:0000723!4.97e-13!436;CL:0000003!1.58e-11!722;CL:0000034!1.84e-11!444;CL:0000057!3.11e-11!75;CL:0002057!1.31e-09!42;CL:0000860!3.38e-09!45;CL:0000063!1.95e-08!578;CL:0002320!4.34e-08!365;CL:0000134!9.08e-08!358;CL:0000192!5.47e-07!42;CL:0000514!5.47e-07!42;CL:0000219!9.67e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.62e-11;33!CL:0002057;6.62e-11;33!CL:0000473;2.21e-08;39!CL:0000234;2.21e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.14e-13,427;CL:0000723,1.51e-13,433;CL:0000034,8.44e-12,441;CL:0000057,2.02e-11,76;CL:0000860,3.21e-10,42;CL:0002057,3.21e-10,42;CL:0000473,1.38e-09,48;CL:0000234,1.38e-09,48;CL:0002320,1.83e-08,361;CL:0000134,2.38e-08,354;CL:0000219,4.23e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.77e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.01e-08!167;UBERON:0002384!7.76e-08!375;UBERON:0000926!3.71e-07!448;UBERON:0004120!3.71e-07!448;UBERON:0006603!3.71e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.05e-12,315;UBERON:0004120,7.05e-12,315;UBERON:0006603,7.05e-12,315;UBERON:0002384,2.57e-08,371;UBERON:0002204,5.91e-08,167;UBERON:0007503,7.80e-07,78 | |||
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| ||
|short_description=p@chrX:153596060..153596111,- | |short_description=p@chrX:153596060..153596111,- | ||
}} | }} |
Latest revision as of 06:59, 1 August 2015
Short description: | p@chrX:153596060..153596111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:153596060..153596111, - |
Coexpression cluster: | C965_smooth_Osteoblast_Adipocyte_aorta_penis_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.14e-13 | 427 |
somatic stem cell | 1.51e-13 | 433 |
stem cell | 8.44e-12 | 441 |
fibroblast | 2.02e-11 | 76 |
classical monocyte | 3.21e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.21e-10 | 42 |
defensive cell | 1.38e-09 | 48 |
phagocyte | 1.38e-09 | 48 |
connective tissue cell | 1.83e-08 | 361 |
mesenchymal cell | 2.38e-08 | 354 |
motile cell | 4.23e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 7.05e-12 | 315 |
mesoderm-derived structure | 7.05e-12 | 315 |
presumptive mesoderm | 7.05e-12 | 315 |
connective tissue | 2.57e-08 | 371 |
musculoskeletal system | 5.91e-08 | 167 |
epithelial vesicle | 7.80e-07 | 78 |