FFCP PHASE1:Hg19::chrX:55306515..55306524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000440645_5end | |association_with_transcript=-51bp_to_ENST00000440645_5end | ||
|cluster_id=chrX:55306515..55306524,+ | |||
|coexpression_cluster_id=C322 | |coexpression_cluster_id=C322 | ||
|description=CAGE_peak_2_at_ENST00000440645_5end | |description=CAGE_peak_2_at_ENST00000440645_5end | ||
|id=chrX:55306515..55306524,+ | |id=chrX:55306515..55306524,+ | ||
|ontology_enrichment_celltype=CL:1000415!1.39e-08!2;CL:0000054!2.48e-08!2;CL:0000137!2.48e-08!2;CL:0000092!2.48e-08!2 | |ontology_enrichment_celltype=CL:1000415!1.39e-08!2;CL:0000054!2.48e-08!2;CL:0000137!2.48e-08!2;CL:0000092!2.48e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;5.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.66e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.53e-09;5 | |||
|ontology_enrichment_disease=DOID:201!2.09e-10!6;DOID:0060100!2.09e-10!6;DOID:4231!1.73e-08!2;DOID:1907!1.73e-08!2;DOID:200!2.48e-08!2;DOID:4305!2.48e-08!2 | |ontology_enrichment_disease=DOID:201!2.09e-10!6;DOID:0060100!2.09e-10!6;DOID:4231!1.73e-08!2;DOID:1907!1.73e-08!2;DOID:200!2.48e-08!2;DOID:4305!2.48e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.74e-16!8;UBERON:0007195!8.63e-16!1;UBERON:0001282!9.99e-16!1;UBERON:0009842!9.99e-16!1;UBERON:0003704!9.99e-16!1;UBERON:0001171!9.99e-16!1;UBERON:0001172!9.99e-16!1;UBERON:0003135!3.65e-12!11;UBERON:0002294!3.30e-09!7;UBERON:0001173!3.30e-09!7;UBERON:0004912!3.30e-09!7 | |ontology_enrichment_uberon=UBERON:0000473!1.74e-16!8;UBERON:0007195!8.63e-16!1;UBERON:0001282!9.99e-16!1;UBERON:0009842!9.99e-16!1;UBERON:0003704!9.99e-16!1;UBERON:0001171!9.99e-16!1;UBERON:0001172!9.99e-16!1;UBERON:0003135!3.65e-12!11;UBERON:0002294!3.30e-09!7;UBERON:0001173!3.30e-09!7;UBERON:0004912!3.30e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.21e-40;1!UBERON:0007195;2.21e-40;1!UBERON:0009842;2.21e-40;1!UBERON:0003704;2.21e-40;1!UBERON:0001171;2.21e-40;1!UBERON:0001172;2.21e-40;1!UBERON:0002294;1.80e-23;7!UBERON:0001173;1.80e-23;7!UBERON:0002110;1.83e-14;3!UBERON:0001280;1.83e-14;3!UBERON:0004647;1.83e-14;3!UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0002046;2.53e-09;5!UBERON:0002423;2.50e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.21e-40,1;UBERON:0001282,3.30e-40,1;UBERON:0009842,3.30e-40,1;UBERON:0003704,3.30e-40,1;UBERON:0001171,3.30e-40,1;UBERON:0001172,3.30e-40,1;UBERON:0002294,1.61e-18,9;UBERON:0001173,1.61e-18,9;UBERON:0004912,1.61e-18,9;UBERON:0002110,1.60e-14,3;UBERON:0006242,1.60e-14,3;UBERON:0001280,2.09e-14,3;UBERON:0004647,2.09e-14,3;UBERON:0005171,2.09e-14,3;UBERON:0002046,2.53e-09,5;UBERON:0004117,2.53e-09,5;UBERON:0007689,2.53e-09,5;UBERON:0007123,2.53e-09,5;UBERON:0003091,2.53e-09,5;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0003929,2.12e-07,54;UBERON:0009497,2.50e-07,25;UBERON:0000015,2.50e-07,25;UBERON:0002423,2.50e-07,25;UBERON:0006235,2.50e-07,25;UBERON:0004161,2.50e-07,25 | |||
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|short_description=p2@ENST00000440645 | |short_description=p2@ENST00000440645 | ||
}} | }} |
Latest revision as of 08:57, 1 August 2015
Short description: | p2@ENST00000440645 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000440645_5end |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | -51bp_to_ENST00000440645_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.21e-40 | 1 |
intralobular bile duct | 3.30e-40 | 1 |
acinus | 3.30e-40 | 1 |
intrahepatic bile duct | 3.30e-40 | 1 |
portal lobule | 3.30e-40 | 1 |
hepatic acinus | 3.30e-40 | 1 |
biliary system | 1.61e-18 | 9 |
biliary tree | 1.61e-18 | 9 |
biliary bud | 1.61e-18 | 9 |
gallbladder | 1.60e-14 | 3 |
gall bladder primordium | 1.60e-14 | 3 |
liver parenchyma | 2.09e-14 | 3 |
liver lobule | 2.09e-14 | 3 |
hepatic duct | 2.09e-14 | 3 |
thyroid gland | 2.53e-09 | 5 |
pharyngeal pouch | 2.53e-09 | 5 |
thyroid diverticulum | 2.53e-09 | 5 |
pharyngeal pouch 2 | 2.53e-09 | 5 |
thyroid primordium | 2.53e-09 | 5 |
bile duct | 7.25e-08 | 6 |
digestive system duct | 7.25e-08 | 6 |
gut epithelium | 2.12e-07 | 54 |
epithelium of foregut-midgut junction | 2.50e-07 | 25 |
anatomical boundary | 2.50e-07 | 25 |
hepatobiliary system | 2.50e-07 | 25 |
foregut-midgut junction | 2.50e-07 | 25 |
septum transversum | 2.50e-07 | 25 |